Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU4-15P-201ENST00000362613 141 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU1-22P-201ENST00000363334 158 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU6-1285P-201ENST00000363480 105 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 Y_RNA.465-201ENST00000384293 102 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR515-2-201ENST00000384883 83 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR515-1-201ENST00000384884 83 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR548B-201ENST00000385247 97 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AL136310.1-201ENST00000404926 654 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR1287-201ENST00000408492 90 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU2-72P-201ENST00000411175 163 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 RPL22P18-201ENST00000417197 377 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 MTND1P32-201ENST00000433043 938 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AC099677.2-201ENST00000436385 175 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 COX6CP14-201ENST00000469580 174 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 UBL5P1-201ENST00000507979 193 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU6-201P-201ENST00000517100 61 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 CENPUP1-201ENST00000526649 1202 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AC013828.2-201ENST00000532487 235 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AC099786.3-201ENST00000565735 1410 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AL078603.1-201ENST00000603824 313 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AL592221.1-201ENST00000605266 382 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AL139022.2-201ENST00000606934 443 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AL359547.2-201ENST00000615810 418 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR8070-201ENST00000616510 88 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 AC131159.1-201ENST00000621854 213 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 OR4G3P-201ENST00000633500 913 ntBASIC0.68□□□□□ -2.3
TRAV1-1A0A0B4J248 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 Y_RNA.224-201ENST00000364308 111 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 SNORA63D-201ENST00000364359 132 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU6-26P-201ENST00000383985 107 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 RPL23AP32-201ENST00000395315 459 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 MRPL35P1-201ENST00000404272 572 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AL590556.1-201ENST00000423231 483 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AL353777.1-201ENST00000425552 326 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AC244505.5-201ENST00000443639 207 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AC104806.1-201ENST00000508720 308 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AC005741.1-201ENST00000511094 432 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU6-1003P-201ENST00000517099 105 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AC092451.2-201ENST00000538746 658 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AC123904.2-201ENST00000548059 300 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR548AC-201ENST00000585049 88 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 PART1_2.1-201ENST00000612397 250 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR6504-201ENST00000613520 61 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AC009033.1-201ENST00000624279 431 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 AC010615.1-201ENST00000594254 1764 ntBASIC0.67□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU6-968P-201ENST00000384076 107 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR578-201ENST00000384828 96 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU6-1176P-201ENST00000390955 107 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 MTATP6P20-201ENST00000414147 562 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 AC019070.1-201ENST00000415008 1024 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 EBAG9P1-201ENST00000418955 543 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 PRPS1P1-201ENST00000445305 876 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 AL358794.1-201ENST00000445689 381 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 HMGN2P9-201ENST00000476875 229 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 AC022447.4-201ENST00000504053 364 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR449C-201ENST00000516047 92 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 SNORA19.3-201ENST00000516165 130 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 RNA5SP481-201ENST00000516814 122 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 SNORD60.2-201ENST00000516883 86 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 AC107934.1-201ENST00000522215 217 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 AC115990.1-201ENST00000526957 301 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 AL512310.8-201ENST00000550183 120 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR3937-201ENST00000580135 106 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR4307-201ENST00000582802 84 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 AC013244.2-201ENST00000603396 103 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 BNIP3P31-201ENST00000604515 566 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 AC092106.3-201ENST00000611308 722 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 AC027335.2-201ENST00000624030 375 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.66□□□□□ -2.3
TRAV1-1A0A0B4J248 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.65□□□□□ -2.3
TRAV1-1A0A0B4J248 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
TRAV1-1A0A0B4J248 SNORA4.1-201ENST00000364263 144 ntBASIC0.65□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU6-371P-201ENST00000364283 108 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms