Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AP000648.3-201ENST00000623539 4507 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-179P-201ENST00000363350 107 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 RNY1P12-201ENST00000364251 105 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 SNORD114-6-201ENST00000364393 72 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 MIR1323-201ENST00000408090 73 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AC139712.2-201ENST00000424302 339 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AL606662.1-201ENST00000445763 553 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AL360221.1-201ENST00000445989 335 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 FO393415.2-201ENST00000480085 343 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AC104806.1-201ENST00000508720 308 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AP001893.2-201ENST00000526949 202 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AP001485.1-201ENST00000604799 199 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AC104010.1-201ENST00000616889 150 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AC009878.1-201ENST00000621819 340 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 AC138649.3-201ENST00000622154 254 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 Z69720.2-201ENST00000624755 279 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.31□□□□□ -2.2
RHBDD3Q9Y3P4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 RNU4-56P-201ENST00000364700 142 ntBASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-360P-201ENST00000390944 104 ntBASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 RPL30P13-201ENST00000418873 348 ntBASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 SNORD13-201ENST00000459299 104 ntBASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 Y_RNA.675-201ENST00000516389 149 ntBASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 AL121890.5-201ENST00000620848 304 ntBASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 AC019226.2-201ENST00000625973 424 ntBASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 AC241585.2-209ENST00000638217 143 ntBASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RHBDD3Q9Y3P4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 RNU4-15P-201ENST00000362613 141 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 RNU5F-6P-201ENST00000362979 116 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-105P-201ENST00000363909 104 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 MIR517C-201ENST00000385103 95 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-1176P-201ENST00000390955 107 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 AL513185.2-201ENST00000425543 193 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 AL365184.2-201ENST00000431139 435 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 JTBP1-201ENST00000441314 247 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 AL009048.1-201ENST00000450437 298 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 DUXAP8-207ENST00000456786 622 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 RPS26P55-201ENST00000471178 356 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 RPL26P26-201ENST00000480251 434 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 RPL36AP21-201ENST00000490372 323 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 AC145146.1-201ENST00000496370 254 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 RBBP4P6-201ENST00000508098 202 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 AC074344.1-201ENST00000512823 224 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 AC104136.1-201ENST00000512969 394 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 SNORA3.4-201ENST00000515969 96 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 AC109479.2-201ENST00000517842 174 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 SUMO2P18-201ENST00000518873 252 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 AP003181.2-201ENST00000528941 181 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 SUB1P3-201ENST00000564581 315 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 MTND1P8-201ENST00000571424 950 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 SNORD53B-201ENST00000577887 78 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 SNORA77B-201ENST00000578179 125 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 AL451064.1-201ENST00000607718 471 ntBASIC1.29□□□□□ -2.2
RHBDD3Q9Y3P4 SNORD113-6-201ENST00000363345 75 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-271P-201ENST00000363858 105 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-1141P-201ENST00000364520 107 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 RPL23AP32-201ENST00000395315 459 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 RNU2-3P-201ENST00000410144 191 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 MTCO2P8-201ENST00000412213 658 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 KATNBL1P3-201ENST00000443475 909 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AC079448.1-201ENST00000449377 373 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 RPL31P3-201ENST00000458430 332 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AL049829.1-201ENST00000465411 156 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 RPL9P9-202ENST00000466501 579 ntBASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.28□□□□□ -2.2
RHBDD3Q9Y3P4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms