Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RPS4XP22-201ENST00000480755 780 ntBASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 MIR5692C2-201ENST00000577959 77 ntBASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 AL138963.2-201ENST00000605137 226 ntBASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 MIR6810-201ENST00000622701 70 ntBASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 AC048347.1-201ENST00000624621 427 ntBASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
AP4E1Q9UPM8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 SNORA7.2-201ENST00000364446 145 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 Y_RNA.262-201ENST00000364641 102 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 RNU6-1117P-201ENST00000384525 104 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 MIR493-201ENST00000385254 89 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 RNU6-1197P-201ENST00000391183 107 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 RNU2-51P-201ENST00000410708 197 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AC074117.2-201ENST00000417130 397 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AC138623.1-201ENST00000418060 216 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AL358075.3-201ENST00000426289 226 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 NDUFB4P6-201ENST00000436819 366 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 GPM6BP3-201ENST00000442797 145 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AC005042.3-201ENST00000453230 174 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AP000705.1-201ENST00000454567 350 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AL049830.2-201ENST00000480072 201 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 RPL30P5-201ENST00000494923 336 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AC078918.1-201ENST00000498515 228 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 RNU6-1073P-201ENST00000517182 106 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 CR383656.8-201ENST00000549046 145 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 HSPE1P4-201ENST00000550617 308 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AC005828.6-201ENST00000606610 232 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 ZYXP1-201ENST00000617638 118 ntBASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP4E1Q9UPM8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 RNU6-873P-201ENST00000363833 107 ntBASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 RN7SKP280-201ENST00000364196 304 ntBASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 RNU6-1141P-201ENST00000364520 107 ntBASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 RNU6-1130P-201ENST00000365434 107 ntBASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 HMGN2P30-201ENST00000423237 256 ntBASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 AL356535.1-201ENST00000440335 398 ntBASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 RPL37P4-201ENST00000448908 268 ntBASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 AC016632.1-201ENST00000503994 196 ntBASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 MIR4697-201ENST00000582977 78 ntBASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 AC012468.1-201ENST00000604888 430 ntBASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP4E1Q9UPM8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 RBBP8P1-201ENST00000449447 1844 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 AC073073.2-201ENST00000609827 2578 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 Y_RNA.272-201ENST00000364696 102 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 RNA5SP283-201ENST00000365604 119 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 SNORD116-18-201ENST00000383961 92 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 Y_RNA.580-201ENST00000391004 95 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 AL357139.1-201ENST00000407792 426 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 AC010095.1-201ENST00000443543 144 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 snoU13.6-201ENST00000458785 104 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 RNU6-1282P-201ENST00000516735 96 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 RNU6-1198P-201ENST00000516904 67 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 MIR2116-201ENST00000517221 80 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 AC233702.2-202ENST00000562547 291 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 RNA5SP196-201ENST00000625967 102 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 MTND1P7-201ENST00000632801 297 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 ZNF204P-201ENST00000416749 2397 ntBASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.03□□□□□ -1.76
AP4E1Q9UPM8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
AP4E1Q9UPM8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.02□□□□□ -1.77
AP4E1Q9UPM8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms