Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 AC009093.8-201ENST00000641769 292 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 Y_RNA.111-201ENST00000363248 100 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-1285P-201ENST00000363480 105 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 Y_RNA.319-201ENST00000365138 92 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 PTMAP5-201ENST00000393073 333 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 RNU2-20P-201ENST00000410425 191 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 RN7SKP53-201ENST00000411337 315 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 AL358075.3-201ENST00000426289 226 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 HSPE1P25-201ENST00000455484 251 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 SNORA59A-201ENST00000459326 152 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 RPL26P26-201ENST00000480251 434 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 RNU4-71P-201ENST00000516258 113 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-58P-201ENST00000517143 103 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 RN7SKP40-201ENST00000517211 242 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 MIR3200-201ENST00000580767 85 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 MIR4423-201ENST00000580922 80 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 BX284668.6-201ENST00000606899 438 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 AL365434.2-201ENST00000607979 234 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 AC048347.1-201ENST00000624621 427 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 ADAM3A-203ENST00000461344 2157 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 AL021368.2-201ENST00000606125 5352 ntBASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.36□□□□□ -1.87
CDC42EP3Q9UKI2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AC092268.1-201ENST00000342691 405 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-858P-201ENST00000362436 107 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 Y_RNA.117-201ENST00000363294 101 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-879P-201ENST00000364328 108 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 SNORA73.2-201ENST00000364946 201 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-213P-201ENST00000384051 104 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 Y_RNA.504-201ENST00000384481 104 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-102P-201ENST00000384485 104 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 UBA52P6-201ENST00000399822 382 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 Z92545.1-201ENST00000411782 234 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 RPS26P42-201ENST00000413485 326 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AL714022.1-201ENST00000439897 151 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 GPM6BP3-201ENST00000442797 145 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AL136097.1-201ENST00000456945 913 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 RPL32P34-201ENST00000486380 400 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AC025554.1-201ENST00000505641 188 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-1198P-201ENST00000516904 67 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 ACA59.2-201ENST00000517061 156 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AC090897.2-201ENST00000581715 130 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 MIR486-1-201ENST00000612171 68 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 AL034408.1-202ENST00000636088 415 ntBASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDC42EP3Q9UKI2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 RNA5SP361-201ENST00000362686 118 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-1266P-201ENST00000362794 105 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-290P-201ENST00000365212 101 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-1145P-201ENST00000384246 107 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 MIR329-1-201ENST00000385028 80 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 U3.19-201ENST00000390893 196 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 NDUFB4P4-201ENST00000404822 243 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 SNORD12B-201ENST00000410433 91 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AL139156.1-201ENST00000412785 841 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AC005300.1-201ENST00000428401 373 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 AC005002.2-201ENST00000438228 269 ntBASIC3.34□□□□□ -1.87
CDC42EP3Q9UKI2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms