Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MTND3P25-201ENST00000509243 135 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.21□□□□□ -2.22
VAPAQ9P0L0 RNU5A-4P-201ENST00000516588 111 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 AC091489.2-201ENST00000566263 604 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 MIR5697-201ENST00000578045 78 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 MIR4303-201ENST00000581299 66 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.21□□□□□ -2.22
VAPAQ9P0L0 AL031775.1-201ENST00000607014 887 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 RNU6-87P-201ENST00000607561 108 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
VAPAQ9P0L0 MIR8063-201ENST00000621930 81 ntBASIC1.21□□□□□ -2.22
VAPAQ9P0L0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.2□□□□□ -2.22
VAPAQ9P0L0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VAPAQ9P0L0 SNORD32B-201ENST00000364460 84 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 Y_RNA.332-201ENST00000365271 113 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 MIR558-201ENST00000384920 94 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 OOSP1P1-201ENST00000423265 274 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 MTND4P20-201ENST00000424125 869 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 MTCO2P23-201ENST00000425216 680 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 MTND5P25-201ENST00000430499 799 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AC000111.3-201ENST00000433478 193 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.2□□□□□ -2.22
VAPAQ9P0L0 FTH1P25-201ENST00000447665 469 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AC099513.1-201ENST00000490423 301 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AC097473.1-201ENST00000508142 408 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.2□□□□□ -2.22
VAPAQ9P0L0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.2□□□□□ -2.22
VAPAQ9P0L0 MTND3P5-201ENST00000512798 333 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AC115990.1-201ENST00000526957 301 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AC087441.2-201ENST00000529141 262 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 MIR4999-201ENST00000585029 91 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AP000811.1-201ENST00000603803 651 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AL359999.1-201ENST00000604513 294 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AL034555.1-201ENST00000604816 211 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 RMST_4.1-201ENST00000616886 107 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AC104010.1-201ENST00000616889 150 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AL359740.1-201ENST00000624340 592 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AC010608.3-201ENST00000625048 527 ntBASIC1.2□□□□□ -2.22
VAPAQ9P0L0 AL391994.1-201ENST00000254724 282 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 RNU4-15P-201ENST00000362613 141 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 RNU6-61P-201ENST00000365528 109 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 SNORD26-201ENST00000384147 75 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 AL589872.1-201ENST00000426602 288 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 MED13P1-201ENST00000428342 171 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 AL135790.2-201ENST00000437701 267 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.19□□□□□ -2.22
VAPAQ9P0L0 RPL31P58-201ENST00000469001 379 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 SNRPGP7-201ENST00000469016 106 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VAPAQ9P0L0 RNA5SP445-201ENST00000515889 115 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 RNU6-902P-201ENST00000517212 91 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.19□□□□□ -2.22
VAPAQ9P0L0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.19□□□□□ -2.22
VAPAQ9P0L0 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.19□□□□□ -2.22
VAPAQ9P0L0 AC027807.1-201ENST00000559921 996 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 SNORA77B-201ENST00000578179 125 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 AC018714.1-201ENST00000605028 208 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 AC018889.1-201ENST00000605372 397 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 AC019226.2-201ENST00000625973 424 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 AC068205.3-201ENST00000636385 468 ntBASIC1.19□□□□□ -2.22
VAPAQ9P0L0 RNU6-26P-201ENST00000383985 107 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 RNU6-296P-201ENST00000384608 107 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 RNU6-1245P-201ENST00000411130 106 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 AL008987.1-201ENST00000415528 237 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
VAPAQ9P0L0 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.18□□□□□ -2.22
VAPAQ9P0L0 SNRPEP8-201ENST00000442866 260 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 AL513124.1-201ENST00000450410 614 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 RNU1-131P-201ENST00000458943 161 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 AL049829.1-201ENST00000465411 156 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 RPS26P55-201ENST00000471178 356 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 AC005741.1-201ENST00000511094 432 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.18□□□□□ -2.22
VAPAQ9P0L0 AP001893.2-201ENST00000526949 202 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 AC087883.1-201ENST00000551882 391 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.18□□□□□ -2.22
VAPAQ9P0L0 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.18□□□□□ -2.22
VAPAQ9P0L0 MTCO2P2-201ENST00000591258 225 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 AC073539.2-201ENST00000597113 165 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 ZNF209P-201ENST00000593450 2304 ntBASIC1.18□□□□□ -2.22
VAPAQ9P0L0 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 RNU5F-6P-201ENST00000362979 116 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 RNU6-1285P-201ENST00000363480 105 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 RNU6-1176P-201ENST00000390955 107 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 Y_RNA.608-201ENST00000410647 95 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 AC123900.1-201ENST00000420390 96 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.17□□□□□ -2.22
VAPAQ9P0L0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.17□□□□□ -2.22
VAPAQ9P0L0 AC245517.4-201ENST00000448601 281 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.17□□□□□ -2.22
VAPAQ9P0L0 AC104806.1-201ENST00000508720 308 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.17□□□□□ -2.22
VAPAQ9P0L0 AL161670.1-201ENST00000554348 137 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 HMGB1P33-201ENST00000563485 527 ntBASIC1.17□□□□□ -2.22
VAPAQ9P0L0 MIR3945-201ENST00000581853 98 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms