Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC087884.1-201ENST00000469738 328 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC104564.1-201ENST00000493028 407 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 MTND3P25-201ENST00000509243 135 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 MTND1P22-201ENST00000510572 951 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 RNU2-46P-201ENST00000517038 113 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 CBX3P4-201ENST00000538909 354 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC145350.1-201ENST00000567426 208 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 MIR4285-201ENST00000581001 85 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC091135.1-201ENST00000585943 307 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC073539.2-201ENST00000597113 165 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC099842.1-201ENST00000619919 596 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 MTND4P4-201ENST00000439033 1366 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 MIR126-201ENST00000362291 85 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 RNU5E-7P-201ENST00000365290 117 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 MIR597-201ENST00000384968 97 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 MT-TH-201ENST00000387441 69 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 AL033519.2-201ENST00000403958 392 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 RNU6-607P-201ENST00000411283 108 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 C1DP2-201ENST00000418167 426 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 CBX3P6-201ENST00000430257 527 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 AL603825.1-201ENST00000438481 80 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 RPL39P29-201ENST00000447779 157 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 AP002453.2-201ENST00000533503 320 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 AC012414.6-201ENST00000568241 401 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 AL603755.1-201ENST00000619504 163 ntBASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.66□□□□□ -2.14
KLHL28Q9NXS3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 U8.3-201ENST00000363321 132 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 SNORD115-7-201ENST00000365306 82 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 SNORA26.8-201ENST00000391306 124 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 RNU6-195P-201ENST00000411352 109 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 HMGB1P18-201ENST00000438801 619 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AL022238.1-201ENST00000442557 355 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 MTND3P7-201ENST00000474435 343 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 MTND2P33-201ENST00000506452 1031 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 Vault.3-201ENST00000516676 95 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AC090572.1-201ENST00000519251 160 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 MTND3P12-201ENST00000559068 328 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AL133173.2-201ENST00000614270 90 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 AL603839.4-201ENST00000624658 1005 ntBASIC1.65□□□□□ -2.15
KLHL28Q9NXS3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 Y_RNA.99-201ENST00000363138 105 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 RNA5SP501-201ENST00000410990 112 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AC009310.1-201ENST00000414414 451 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 CYCSP33-201ENST00000414485 327 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 OR6C66P-201ENST00000414917 930 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 MTND2P18-201ENST00000419962 1030 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AL591043.1-201ENST00000432461 424 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 MTND1P26-201ENST00000440488 538 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AL136380.1-201ENST00000447970 162 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AL122001.1-201ENST00000457027 370 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AC104806.1-201ENST00000508720 308 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AC093259.1-201ENST00000509755 300 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 SNORA44.1-201ENST00000517031 108 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 CYP2C61P-201ENST00000604072 290 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AL022345.1-201ENST00000607292 135 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AC103810.8-201ENST00000607347 118 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AC063943.3-201ENST00000615562 356 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AC091931.1-201ENST00000623488 728 ntBASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.64□□□□□ -2.15
KLHL28Q9NXS3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms