Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SIX2Q9NPC8 RNA5SP289-201ENST00000362332 137 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 Y_RNA.509-201ENST00000384506 99 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 RNU6-95P-201ENST00000384697 107 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 RN7SKP158-201ENST00000410453 326 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AL117339.3-201ENST00000418733 162 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.48□□□□□ -2.01
SIX2Q9NPC8 RPS15AP5-201ENST00000436276 388 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.48□□□□□ -2.01
SIX2Q9NPC8 HIGD1AP2-201ENST00000446367 280 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AC130509.1-201ENST00000464158 433 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 RN7SL636P-201ENST00000497504 294 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AC113155.1-201ENST00000511141 769 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.48□□□□□ -2.01
SIX2Q9NPC8 RN7SKP282-201ENST00000516824 299 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 SNORD59.2-201ENST00000516873 68 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AC022634.1-201ENST00000520765 532 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AC006199.1-201ENST00000548728 219 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AC007151.1-201ENST00000572774 483 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AC006023.1-201ENST00000603944 259 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AC004852.3-201ENST00000614131 326 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 AL359314.1-201ENST00000616913 261 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SIX2Q9NPC8 ADAM3A-203ENST00000461344 2157 ntBASIC2.48□□□□□ -2.01
SIX2Q9NPC8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.47□□□□□ -2.01
SIX2Q9NPC8 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 RNU6-78P-201ENST00000362897 107 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 RNU6-942P-201ENST00000363002 107 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 RNU5E-7P-201ENST00000365290 117 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SIX2Q9NPC8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AL445529.1-201ENST00000398713 389 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AC074085.1-201ENST00000413598 418 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AL365496.1-201ENST00000426885 215 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AL031274.1-201ENST00000450334 232 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AC107399.1-201ENST00000451226 265 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AC092001.1-201ENST00000453012 261 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AC013470.1-201ENST00000453438 462 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AC096745.1-201ENST00000509945 370 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 RPL39P5-202ENST00000512505 151 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AC109479.2-201ENST00000517842 174 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AC093027.1-201ENST00000546698 429 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AL355375.2-201ENST00000574825 175 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AL133393.1-201ENST00000603277 287 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AL121917.1-203ENST00000605534 577 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.47□□□□□ -2.01
SIX2Q9NPC8 CTSLP2-204ENST00000629029 392 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 U4.7-201ENST00000638126 106 ntBASIC2.47□□□□□ -2.01
SIX2Q9NPC8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SIX2Q9NPC8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 SNORD114-30-201ENST00000364448 72 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 RNU6-827P-201ENST00000365553 106 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AC104332.2-201ENST00000429959 156 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AL645568.3-201ENST00000433683 316 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 RPS3AP52-201ENST00000435639 297 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AL513328.1-201ENST00000446460 224 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 RNU6-581P-201ENST00000516214 105 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 SNORA43.2-201ENST00000516652 128 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AL121821.2-201ENST00000556081 394 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 MIR4795-201ENST00000584182 89 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AC020895.1-201ENST00000595362 272 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AC113139.1-201ENST00000605049 239 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AC011890.2-201ENST00000613393 294 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 MIR3199-2-201ENST00000636243 86 ntBASIC2.46□□□□□ -2.02
SIX2Q9NPC8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SIX2Q9NPC8 ZNF720P1-201ENST00000562403 1939 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SIX2Q9NPC8 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 RNU6-1280P-201ENST00000365211 107 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.45□□□□□ -2.02
SIX2Q9NPC8 FTH1P15-201ENST00000406984 280 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 RNU2-49P-201ENST00000410666 184 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 RNU4-14P-201ENST00000410858 122 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 RPL37P10-201ENST00000412884 288 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SIX2Q9NPC8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.45□□□□□ -2.02
SIX2Q9NPC8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.45□□□□□ -2.02
SIX2Q9NPC8 FABP5P14-201ENST00000437273 393 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 RNU7-187P-201ENST00000458985 68 ntBASIC2.45□□□□□ -2.02
SIX2Q9NPC8 Y_RNA.635-201ENST00000459041 101 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms