Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 SNRPGP18-201ENST00000553000 214 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 DNAJC8P1-201ENST00000554535 372 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AC021739.1-201ENST00000559631 174 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 HMGN2P15-201ENST00000585707 270 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AC078899.3-201ENST00000599065 212 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 MIR3976-201ENST00000606807 139 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 AC133104.2-201ENST00000615272 193 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.09□□□□□ -1.91
USP29Q9HBJ7 MTND5P30-201ENST00000452896 1731 ntBASIC3.09□□□□□ -1.91
USP29Q9HBJ7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.09□□□□□ -1.92
USP29Q9HBJ7 AC110491.1-201ENST00000562191 2010 ntBASIC3.09□□□□□ -1.92
USP29Q9HBJ7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.08□□□□□ -1.92
USP29Q9HBJ7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
USP29Q9HBJ7 RNU6-799P-201ENST00000363567 107 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 SNORA71.1-201ENST00000364523 117 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 RNU1-101P-201ENST00000391171 127 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AL513475.1-201ENST00000406602 315 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AC023141.4-201ENST00000412031 328 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.08□□□□□ -1.92
USP29Q9HBJ7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AL031183.1-201ENST00000457667 207 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 RNU7-23P-201ENST00000459465 62 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 RPS29P27-201ENST00000463711 170 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AC008571.1-201ENST00000467232 300 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 RN7SL499P-201ENST00000481141 276 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AC006483.1-201ENST00000487308 313 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 MTND4LP22-201ENST00000508209 276 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 RPL23AP94-201ENST00000512518 302 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 SCARNA16.2-201ENST00000516520 172 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AC109446.1-201ENST00000566172 220 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AC004852.3-201ENST00000614131 326 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 MIR6733-201ENST00000635723 61 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 AC091564.4-201ENST00000533934 2194 ntBASIC3.08□□□□□ -1.92
USP29Q9HBJ7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
USP29Q9HBJ7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.08□□□□□ -1.92
USP29Q9HBJ7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 MIR22-201ENST00000362190 85 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 Y_RNA.2-201ENST00000362330 96 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 RNU6-105P-201ENST00000363909 104 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 U8.9-201ENST00000365667 134 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 Y_RNA.445-201ENST00000384168 102 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 Y_RNA.463-201ENST00000384271 102 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 RNU6-790P-201ENST00000384479 105 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 AL139281.1-201ENST00000422120 335 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 AC018865.2-201ENST00000423631 129 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 RPS29P6-201ENST00000438196 145 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 MIR2053-201ENST00000459295 91 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 AC128713.1-201ENST00000471495 306 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 AL163540.1-201ENST00000485382 386 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 AC090096.1-201ENST00000489168 390 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 AK3P2-201ENST00000507976 429 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 AC008885.1-201ENST00000514930 301 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 SMURF2P1-201ENST00000514992 481 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 RNU6-120P-201ENST00000516077 103 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.07□□□□□ -1.92
USP29Q9HBJ7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
USP29Q9HBJ7 MAPK10-266ENST00000641066 6555 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 SNORA41-201ENST00000384675 132 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 MIR181B1-201ENST00000385240 110 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 RNU6-1106P-201ENST00000390845 107 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 snosnR66.1-201ENST00000391095 99 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 BX276092.3-201ENST00000424182 230 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AL365496.1-201ENST00000426885 215 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 MTND4P27-201ENST00000450813 1354 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AC117440.1-201ENST00000474107 571 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AP004217.1-201ENST00000480579 346 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 RNU6-470P-201ENST00000515954 104 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 RNU6-976P-201ENST00000516086 111 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 SNORA31.21-201ENST00000517180 77 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.06□□□□□ -1.92
USP29Q9HBJ7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.06□□□□□ -1.92
USP29Q9HBJ7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms