Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 RPL7P12-201ENST00000446719 750 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AC117503.1-201ENST00000472241 394 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AC079140.5-201ENST00000507882 310 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 RNU6-1281P-201ENST00000516223 105 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 COPS8P3-201ENST00000526024 482 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AC027807.1-201ENST00000559921 996 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 MIR1273D-201ENST00000577266 86 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 MIR4658-201ENST00000584344 65 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 VN1R80P-201ENST00000597126 338 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 MIR6840-201ENST00000611937 71 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AC103705.1-201ENST00000619013 241 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 YWHAEP7-203ENST00000622054 312 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 AC097372.5-201ENST00000623665 376 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 MIR1321-201ENST00000637766 79 ntBASIC2.36□□□□□ -2.03
SNX25Q9H3E2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.36□□□□□ -2.03
SNX25Q9H3E2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.35□□□□□ -2.03
SNX25Q9H3E2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.35□□□□□ -2.03
SNX25Q9H3E2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SNX25Q9H3E2 RNU6-105P-201ENST00000363909 104 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 RNA5SP125-201ENST00000364843 120 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 RNU4-66P-201ENST00000365199 138 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 SNORA70B-201ENST00000384210 135 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 RNA5SP219-201ENST00000390940 113 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 SNORA11.4-201ENST00000408823 129 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 RN7SKP223-201ENST00000410582 62 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 POLHP1-201ENST00000411806 470 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.35□□□□□ -2.03
SNX25Q9H3E2 RN7SL429P-201ENST00000479090 223 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 RN7SL489P-201ENST00000486185 223 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 RN7SL327P-201ENST00000488659 223 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AC140059.1-201ENST00000489238 361 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AC091885.1-201ENST00000506658 268 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.35□□□□□ -2.03
SNX25Q9H3E2 SNORA14.1-201ENST00000516113 141 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 RNA5SP200-201ENST00000516360 103 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 CYCSP27-201ENST00000527643 293 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AP000889.2-201ENST00000532684 490 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AL157687.1-201ENST00000554853 619 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AL162413.1-201ENST00000603198 110 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SNX25Q9H3E2 RN7SL853P-201ENST00000617250 223 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AC009831.4-201ENST00000620744 325 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AC005858.4-201ENST00000623191 700 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AL160394.1-201ENST00000624765 724 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AC068137.3-201ENST00000639191 341 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNX25Q9H3E2 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
SNX25Q9H3E2 Y_RNA.38-201ENST00000362617 102 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 RNU6-428P-201ENST00000362942 107 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 RNU6-1090P-201ENST00000364065 94 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SNX25Q9H3E2 RNU1-57P-201ENST00000384491 166 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 MIR186-201ENST00000384988 86 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNX25Q9H3E2 RNU2-23P-201ENST00000410545 195 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 RN7SKP192-201ENST00000411291 327 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 AF274854.1-201ENST00000413236 615 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 AL117339.3-201ENST00000418733 162 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.34□□□□□ -2.03
SNX25Q9H3E2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNX25Q9H3E2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX25Q9H3E2 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 RNU6-377P-201ENST00000515965 102 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 RNU6-189P-201ENST00000516120 101 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 AC109479.2-201ENST00000517842 174 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.34□□□□□ -2.03
SNX25Q9H3E2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX25Q9H3E2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX25Q9H3E2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX25Q9H3E2 MIR5694-201ENST00000581190 76 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 AL713866.2-201ENST00000603579 219 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 Z82243.1-201ENST00000609432 473 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 uc_338.15-201ENST00000615470 191 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 AL159153.1-201ENST00000619688 317 ntBASIC2.34□□□□□ -2.03
SNX25Q9H3E2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNX25Q9H3E2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNX25Q9H3E2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 RNU6-527P-201ENST00000363425 104 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 RNU6-336P-201ENST00000364891 107 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 SNORA6-201ENST00000384033 151 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 RNU6-1215P-201ENST00000384441 102 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 AIMP1P2-201ENST00000425294 312 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 WARS2P1-201ENST00000429678 537 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 SEPT14P3-201ENST00000439401 183 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 AC243964.1-201ENST00000441814 261 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms