Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RNU6-306P-201ENST00000384617 107 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 MIR34A-201ENST00000385130 110 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 SNORD73A-201ENST00000386062 65 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 BPY2DP-201ENST00000422208 265 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.94□□□□□ -1.94
CDT1Q9H211 AC098831.1-201ENST00000440661 216 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.94□□□□□ -1.94
CDT1Q9H211 MIR2053-201ENST00000459295 91 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 AC130509.1-201ENST00000464158 433 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 RPL7P42-201ENST00000481005 679 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 AC079140.5-201ENST00000507882 310 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 MTCYBP40-201ENST00000509390 1135 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.94□□□□□ -1.94
CDT1Q9H211 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.94□□□□□ -1.94
CDT1Q9H211 SNORA31.21-201ENST00000517180 77 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 AC069113.1-201ENST00000517763 267 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 LINC00933-203ENST00000559812 219 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.94□□□□□ -1.94
CDT1Q9H211 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.94□□□□□ -1.94
CDT1Q9H211 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.94□□□□□ -1.94
CDT1Q9H211 AC123912.5-201ENST00000605470 343 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 AL162730.1-201ENST00000605734 292 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 AC107294.3-201ENST00000609211 526 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 AL669831.3-213ENST00000636676 183 ntBASIC2.94□□□□□ -1.94
CDT1Q9H211 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDT1Q9H211 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.94□□□□□ -1.94
CDT1Q9H211 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.94□□□□□ -1.94
CDT1Q9H211 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.93□□□□□ -1.94
CDT1Q9H211 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.93□□□□□ -1.94
CDT1Q9H211 KPNA2P1-201ENST00000458289 1591 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-37P-201ENST00000362692 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-11P-201ENST00000364234 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-25P-201ENST00000383873 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-1-201ENST00000383898 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-48P-201ENST00000384161 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 Y_RNA.445-201ENST00000384168 102 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-36P-201ENST00000384172 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-4P-201ENST00000384205 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-5P-201ENST00000384238 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-3P-201ENST00000384314 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-16P-201ENST00000384385 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-15P-201ENST00000384534 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-2-201ENST00000384627 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-29P-201ENST00000384637 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-9-201ENST00000384776 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-33P-201ENST00000384793 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 MIR181B1-201ENST00000385240 110 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 ARL5AP4-201ENST00000430731 512 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RPL23AP58-201ENST00000440453 469 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.93□□□□□ -1.94
CDT1Q9H211 AC090096.1-201ENST00000489168 390 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.93□□□□□ -1.94
CDT1Q9H211 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.93□□□□□ -1.94
CDT1Q9H211 RPL39P5-202ENST00000512505 151 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 SNORA9.3-201ENST00000516383 129 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 SNORA31.26-201ENST00000517250 137 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 AC087854.1-201ENST00000519706 414 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.93□□□□□ -1.94
CDT1Q9H211 MIR3162-201ENST00000581818 82 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RPL12P50-201ENST00000603116 116 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 RNU6-6P-201ENST00000606623 107 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 MIR6715A-201ENST00000615929 79 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 AC090617.7-201ENST00000623952 126 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 AC092608.2-201ENST00000624427 218 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDT1Q9H211 MTND5P30-201ENST00000452896 1731 ntBASIC2.93□□□□□ -1.94
CDT1Q9H211 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.92□□□□□ -1.94
CDT1Q9H211 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDT1Q9H211 MTND4P1-201ENST00000457501 1466 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CDT1Q9H211 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDT1Q9H211 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
CDT1Q9H211 RNU6-331P-201ENST00000384724 107 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 MIR518D-201ENST00000385014 87 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 AL031121.1-201ENST00000406553 254 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.92□□□□□ -1.94
CDT1Q9H211 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.92□□□□□ -1.94
CDT1Q9H211 AC113618.1-201ENST00000416747 285 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 USP9YP30-201ENST00000430729 455 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 AL160004.2-201ENST00000432935 350 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.92□□□□□ -1.94
CDT1Q9H211 RNU7-187P-201ENST00000458985 68 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 Y_RNA.653-201ENST00000459091 95 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 RNU7-138P-201ENST00000459479 64 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 RNU6-1045P-201ENST00000516321 107 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 RNU6-1046P-201ENST00000516538 107 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 Y_RNA.687-201ENST00000516558 91 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.92□□□□□ -1.94
CDT1Q9H211 NACAP3-201ENST00000552100 481 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 MIR5690-201ENST00000583739 73 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 OR1M4P-201ENST00000589199 287 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 ELOCP5-201ENST00000604924 333 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 AP000654.2-201ENST00000605633 586 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 AC009229.3-201ENST00000608056 282 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.92□□□□□ -1.94
CDT1Q9H211 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.92□□□□□ -1.94
CDT1Q9H211 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDT1Q9H211 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms