Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MTCYBP9-201ENST00000431021 303 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC243964.1-201ENST00000441814 261 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 RBMY2UP-201ENST00000453474 324 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 RN7SKP210-201ENST00000459176 261 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 U8.20-201ENST00000459445 131 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 RPL30P14-201ENST00000482744 348 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 RPL30P10-201ENST00000488148 337 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 RNU6-581P-201ENST00000516214 105 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 RN7SKP57-201ENST00000517248 293 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC093331.1-201ENST00000521474 169 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC022616.4-201ENST00000522985 181 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 COX6CP5-201ENST00000527162 228 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 MIR4503-201ENST00000582187 83 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 MIR3124-201ENST00000582636 67 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 MIR5188-201ENST00000583467 113 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC124312.5-201ENST00000604451 268 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 MIR8058-201ENST00000615737 89 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC087588.2-201ENST00000617667 426 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC097372.5-201ENST00000623665 376 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC138305.3-201ENST00000624988 240 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AL136164.4-201ENST00000625013 2135 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC241585.2-209ENST00000638217 143 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AL365361.1-201ENST00000566942 3481 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC007256.1-201ENST00000392253 2765 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 MTND5P27-201ENST00000428871 1720 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 RNU6-858P-201ENST00000362436 107 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.47-201ENST00000362697 108 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.153-201ENST00000363615 91 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.176-201ENST00000363815 109 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.380-201ENST00000365663 111 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 RNU6-574P-201ENST00000384265 107 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 EI24P2-201ENST00000397776 1076 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 FTH1P15-201ENST00000406984 280 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 MTCYBP2-201ENST00000407745 171 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 RNU7-169P-201ENST00000459456 61 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 RN7SL807P-201ENST00000470923 297 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AC245166.1-201ENST00000521012 253 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AL590705.4-201ENST00000532209 134 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 MIR3671-201ENST00000580455 88 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 7SK.7-201ENST00000603504 247 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 MIR7851-201ENST00000610611 160 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AL138880.2-201ENST00000616214 239 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AC024581.2-201ENST00000619986 252 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AC009541.1-201ENST00000438279 2662 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 ADAM3A-203ENST00000461344 2157 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 AC110491.1-201ENST00000562191 2010 ntBASIC3.14□□□□□ -1.91
AMBRA1Q9C0C7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.149-201ENST00000363558 117 ntBASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 DPH3P2-201ENST00000422618 250 ntBASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 OR2AQ1P-201ENST00000451972 200 ntBASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 BX510359.1-201ENST00000456973 237 ntBASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 MRPL42P6-201ENST00000486397 371 ntBASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 VN1R91P-201ENST00000594377 169 ntBASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 Z98751.3-201ENST00000604447 521 ntBASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 PRR13P7-201ENST00000605538 430 ntBASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.13□□□□□ -1.91
AMBRA1Q9C0C7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms