Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 CR769776.1-201ENST00000441254 787 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 AL353778.1-201ENST00000603149 408 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 RNU6-88P-201ENST00000606801 100 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 AC130454.1-201ENST00000622948 401 ntBASIC1.18□□□□□ -2.22
UPF3BQ9BZI7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 Y_RNA.68-201ENST00000362881 102 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 RNU6-112P-201ENST00000363599 104 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 Y_RNA.255-201ENST00000364581 97 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 AC027119.1-201ENST00000440877 241 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 JTBP1-201ENST00000441314 247 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 RPL23AP35-201ENST00000451906 501 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 RPL26P26-201ENST00000480251 434 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 AC087854.1-201ENST00000519706 414 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 AP003122.4-201ENST00000530980 758 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 AL590095.2-201ENST00000604136 117 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 SCARNA4-202ENST00000625402 129 ntBASIC1.17□□□□□ -2.22
UPF3BQ9BZI7 SNORA63.3-201ENST00000362682 132 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 RNU6-743P-201ENST00000364151 106 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 SNORD1A-201ENST00000364968 72 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 RNU6-360P-201ENST00000390944 104 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 Y_RNA.623-201ENST00000411128 95 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 TIMM9P1-201ENST00000436122 256 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 USP9YP17-201ENST00000444617 696 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 AC007327.1-201ENST00000447461 264 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 AL353752.1-201ENST00000454946 260 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 HMGN1P13-201ENST00000505795 138 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 ARL2BPP4-201ENST00000506854 471 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 CYP3A137P-201ENST00000562436 69 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 VN1R82P-201ENST00000601481 356 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 AL138889.2-201ENST00000603883 242 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 AC103810.9-201ENST00000606688 112 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 MIR6857-201ENST00000613267 93 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 MIR1248-201ENST00000629190 106 ntBASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
UPF3BQ9BZI7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
UPF3BQ9BZI7 FCF1P10-201ENST00000407590 479 ntBASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 RNU2-62P-201ENST00000410868 191 ntBASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 C8orf59P1-201ENST00000429930 303 ntBASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 TOMM22P2-201ENST00000430735 237 ntBASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 RPS15AP10-201ENST00000432472 382 ntBASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 AL139824.2-201ENST00000458731 1095 ntBASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 AC007742.2-201ENST00000618226 398 ntBASIC1.15□□□□□ -2.23
UPF3BQ9BZI7 MTND5P9-201ENST00000503854 1755 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 SMIM11P1-201ENST00000369586 178 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 SNORA22C-201ENST00000384614 134 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 MTND4P20-201ENST00000424125 869 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 AL589872.1-201ENST00000426602 288 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 AL596276.1-201ENST00000434465 418 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 LARP1BP3-201ENST00000437229 869 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 MTND2P4-201ENST00000445034 1004 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 DUXAP8-207ENST00000456786 622 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 SNORA3.4-201ENST00000515969 96 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 Y_RNA.681-201ENST00000516445 113 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 RN7SKP49-201ENST00000516675 260 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 MTCYBP33-201ENST00000575007 1130 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 AP000654.2-201ENST00000605633 586 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 AL355472.4-201ENST00000610233 626 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 AL138955.1-201ENST00000622881 1040 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 AC126544.2-201ENST00000625174 749 ntBASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
UPF3BQ9BZI7 OR4G2P-201ENST00000328113 903 ntBASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 RNY4P24-201ENST00000362735 96 ntBASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 RNU6-960P-201ENST00000364056 120 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms