Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU7-87P-201ENST00000459343 62 ntBASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 RPL22P13-201ENST00000493291 347 ntBASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 SCARNA17.1-201ENST00000516211 143 ntBASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 SCARNA17.2-201ENST00000516334 143 ntBASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 AC079598.5-201ENST00000547460 117 ntBASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 AC073410.2-201ENST00000603240 332 ntBASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 SNORA51-201ENST00000606420 132 ntBASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 SCARNA17.4-201ENST00000614296 143 ntBASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 SNORD98-201ENST00000636377 67 ntBASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TRIM55Q9BYV6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 Y_RNA.106-201ENST00000363189 100 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 RNU6-450P-201ENST00000364654 107 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 Y_RNA.358-201ENST00000365491 99 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 Y_RNA.424-201ENST00000384063 103 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 MIR153-2-201ENST00000385225 87 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 MIR628-201ENST00000385229 95 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 RNU6-823P-201ENST00000391042 103 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 U3.26-201ENST00000391236 204 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 AL356057.3-201ENST00000402607 340 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 RN7SKP156-201ENST00000410308 342 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 snoU13.6-201ENST00000458785 104 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 RPL7P49-201ENST00000471402 708 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 RN7SL323P-201ENST00000494712 295 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 AIG1P1-201ENST00000503376 148 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 RNU5F-2P-201ENST00000516066 82 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 RNU6-911P-201ENST00000516523 104 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 Y_RNA.721-201ENST00000517207 102 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 RNA5SP179-201ENST00000517284 121 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 AC113195.1-201ENST00000579952 141 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 Z98751.3-201ENST00000604447 521 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 AC091167.4-201ENST00000605079 184 ntBASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
TRIM55Q9BYV6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 AL359854.1-201ENST00000614203 1594 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 U1.1-201ENST00000384101 164 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 MIR186-201ENST00000384988 86 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 RNU6-101P-201ENST00000410323 104 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 AIMP1P2-201ENST00000425294 312 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 AC006989.1-201ENST00000427212 131 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 Z98742.2-201ENST00000431564 187 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 ANXA2P1-201ENST00000505539 926 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 SNORA25.11-201ENST00000515935 105 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 RNA5SP208-201ENST00000516156 78 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 YPEL5P3-201ENST00000547227 352 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 MIR3136-201ENST00000583498 78 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 AC016727.2-201ENST00000603988 621 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 AC137590.2-201ENST00000619709 240 ntBASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TRIM55Q9BYV6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 RNU6-222P-201ENST00000362438 107 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 RNA5SP119-201ENST00000362715 117 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 SNORD14.1-201ENST00000365609 90 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 RNU6-1083P-201ENST00000384022 107 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 U8.10-201ENST00000384260 133 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 RNU1-57P-201ENST00000384491 166 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 U8.11-201ENST00000384699 133 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 U8.12-201ENST00000384701 133 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 AC114482.1-201ENST00000418010 247 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 AC012306.1-201ENST00000423267 114 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 AP000705.1-201ENST00000454567 350 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 U8.18-201ENST00000459285 133 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 RPL31P41-201ENST00000477967 372 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 HMGB1P35-201ENST00000503360 598 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 AC022616.4-201ENST00000522985 181 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 AC008739.2-201ENST00000597006 317 ntBASIC3.72□□□□□ -1.81
TRIM55Q9BYV6 AL161756.2-201ENST00000604597 246 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms