Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CBX3P4-201ENST00000538909 354 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 AC109446.2-201ENST00000567872 497 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 AC104581.2-201ENST00000572227 430 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 MIR3915-201ENST00000578518 97 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.75□□□□□ -2.13
RPRD1AQ96P16 MIR3682-201ENST00000581338 84 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.75□□□□□ -2.13
RPRD1AQ96P16 BNIP3P25-201ENST00000596023 559 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.75□□□□□ -2.13
RPRD1AQ96P16 AC063943.3-201ENST00000615562 356 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 AC007494.3-201ENST00000624660 743 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 Z69720.2-201ENST00000624755 279 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.75□□□□□ -2.13
RPRD1AQ96P16 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.74□□□□□ -2.13
RPRD1AQ96P16 RNU4-21P-201ENST00000362802 126 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 RNU4-42P-201ENST00000364738 142 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 RNA5SP190-201ENST00000365222 118 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 BTF3L4P2-201ENST00000392798 346 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 Y_RNA.597-201ENST00000410463 100 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 SRIP3-201ENST00000413200 219 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 MTND3P17-201ENST00000416968 344 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 RPL31P35-201ENST00000431058 377 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 GPR143P-201ENST00000434155 205 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.74□□□□□ -2.13
RPRD1AQ96P16 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RPRD1AQ96P16 AC027575.1-201ENST00000481064 460 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 MTCYBP35-201ENST00000503630 1137 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 AC074344.1-201ENST00000512823 224 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.74□□□□□ -2.13
RPRD1AQ96P16 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.74□□□□□ -2.13
RPRD1AQ96P16 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.74□□□□□ -2.13
RPRD1AQ96P16 AP003072.2-201ENST00000527756 676 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.74□□□□□ -2.13
RPRD1AQ96P16 AC024614.2-201ENST00000577584 372 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 MIR3683-201ENST00000580847 82 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 MIR4713-201ENST00000582691 75 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.74□□□□□ -2.13
RPRD1AQ96P16 MIR1248-201ENST00000629190 106 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 U4.7-201ENST00000638126 106 ntBASIC1.74□□□□□ -2.13
RPRD1AQ96P16 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RPRD1AQ96P16 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
RPRD1AQ96P16 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.73□□□□□ -2.13
RPRD1AQ96P16 RNU6-1303P-201ENST00000364841 107 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 RNU6-715P-201ENST00000365204 103 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 RNU6-297P-201ENST00000384636 107 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 SNORA40.3-201ENST00000390964 122 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 EIF4EP2-201ENST00000422816 654 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 AL669831.1-202ENST00000428504 417 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 AL591043.1-201ENST00000432461 424 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 GTF2IP13-201ENST00000438487 386 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 KATNBL1P3-201ENST00000443475 909 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 AC079781.2-201ENST00000446424 169 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 AC245102.2-201ENST00000448956 180 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 AL133217.1-201ENST00000450980 425 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.73□□□□□ -2.13
RPRD1AQ96P16 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.73□□□□□ -2.13
RPRD1AQ96P16 AC009646.1-201ENST00000510455 318 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 SNORD27.1-201ENST00000516319 72 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.73□□□□□ -2.13
RPRD1AQ96P16 AP005660.1-201ENST00000522972 293 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.73□□□□□ -2.13
RPRD1AQ96P16 AC022254.1-201ENST00000567857 235 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 MIR4769-201ENST00000584126 77 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 MIR4760-201ENST00000585040 80 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 AC104073.3-201ENST00000610942 955 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 U6.114-201ENST00000636407 96 ntBASIC1.73□□□□□ -2.13
RPRD1AQ96P16 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
RPRD1AQ96P16 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPRD1AQ96P16 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPRD1AQ96P16 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPRD1AQ96P16 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 RNU6-1287P-201ENST00000362914 107 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 RNU6-527P-201ENST00000363425 104 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 RNU6-1060P-201ENST00000384664 107 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 MIR544A-201ENST00000384855 91 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 RNU11-3P-201ENST00000391111 133 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 MTND2P9-201ENST00000422293 931 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AL358453.1-201ENST00000422522 250 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AL365203.2-201ENST00000423444 196 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.72□□□□□ -2.13
RPRD1AQ96P16 FTH1P25-201ENST00000447665 469 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AC079448.1-201ENST00000449377 373 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.72□□□□□ -2.13
RPRD1AQ96P16 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.72□□□□□ -2.13
RPRD1AQ96P16 MTND2P33-201ENST00000506452 1031 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AC008834.1-201ENST00000511612 175 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AC104136.1-201ENST00000512969 394 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AC060788.1-201ENST00000521318 469 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 GNAI2P1-201ENST00000541815 315 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 MIR4775-201ENST00000581168 75 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AC010928.2-201ENST00000588017 287 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 SEPT7P9-203ENST00000604116 343 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 MIR98-201ENST00000606724 119 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AP001506.1-201ENST00000615444 211 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 AL353997.5-201ENST00000618886 171 ntBASIC1.72□□□□□ -2.13
RPRD1AQ96P16 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPRD1AQ96P16 RNU1-17P-201ENST00000363022 152 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms