Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
PTCHD1Q96NR3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PTCHD1Q96NR3 AC110491.1-201ENST00000562191 2010 ntBASIC3.68□□□□□ -1.82
PTCHD1Q96NR3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCHD1Q96NR3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 RNU6-1159P-201ENST00000362933 107 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 Y_RNA.286-201ENST00000364813 102 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 HLFP1-201ENST00000402375 499 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AL358075.3-201ENST00000426289 226 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AC078809.1-201ENST00000427601 140 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AC073901.1-201ENST00000462471 408 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 RPL26P26-201ENST00000480251 434 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 RN7SL323P-201ENST00000494712 295 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 RNU7-110P-201ENST00000516891 62 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AK6P2-201ENST00000549020 471 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AC021231.3-201ENST00000558497 370 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 MIR5685-201ENST00000579080 79 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 MIR4423-201ENST00000580922 80 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AL359198.2-201ENST00000611836 194 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AL354798.1-201ENST00000622505 329 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 AC002546.1-201ENST00000588041 2504 ntBASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTCHD1Q96NR3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 AC092268.1-201ENST00000342691 405 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 Y_RNA.44-201ENST00000362676 108 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 SNORD115-8-201ENST00000363856 82 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 SNORD115-38-201ENST00000365037 82 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 RNU6-326P-201ENST00000365480 107 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 RNU6-21P-201ENST00000384710 107 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 MIR329-1-201ENST00000385028 80 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 U3.19-201ENST00000390893 196 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 Y_RNA.793-201ENST00000411222 111 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 AC083863.1-201ENST00000438811 231 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 snoU13.6-201ENST00000458785 104 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 RNU5F-8P-201ENST00000515941 111 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 RNU2-31P-201ENST00000516954 155 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 CYCSP30-201ENST00000546447 172 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 AC006199.1-201ENST00000548728 219 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 AL512605.2-201ENST00000592972 256 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 AC037487.3-201ENST00000606668 112 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCHD1Q96NR3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.65□□□□□ -1.82
PTCHD1Q96NR3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PTCHD1Q96NR3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PTCHD1Q96NR3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.65□□□□□ -1.82
PTCHD1Q96NR3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 Y_RNA.199-201ENST00000364014 102 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 RNU6-1145P-201ENST00000384246 107 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 MIR30B-201ENST00000384850 88 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 SNORA3.3-201ENST00000408712 125 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 RNA5SP390-201ENST00000410191 113 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 AC005300.1-201ENST00000428401 373 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 AC244670.1-201ENST00000436879 112 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 AC104332.1-201ENST00000440471 797 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 RPL39P29-201ENST00000447779 157 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 Y_RNA.644-201ENST00000459006 113 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 Y_RNA.674-201ENST00000516362 113 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 RNU6-567P-201ENST00000516746 107 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 ACA59.2-201ENST00000517061 156 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 AL360157.1-201ENST00000565962 87 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 MIR3609-201ENST00000582661 80 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PTCHD1Q96NR3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 FAM35DP-201ENST00000323387 2712 ntBASIC3.64□□□□□ -1.83
PTCHD1Q96NR3 RNA5SP295-201ENST00000362655 121 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms