Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AC092798.1-201ENST00000458542 409 ntBASIC3.33□□□□□ -1.88
PGBD1Q96JS3 AC015911.1-201ENST00000495111 156 ntBASIC3.33□□□□□ -1.88
PGBD1Q96JS3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.33□□□□□ -1.88
PGBD1Q96JS3 AC023442.1-201ENST00000531247 422 ntBASIC3.33□□□□□ -1.88
PGBD1Q96JS3 MIR4474-201ENST00000579189 78 ntBASIC3.33□□□□□ -1.88
PGBD1Q96JS3 AC009314.1-201ENST00000603871 304 ntBASIC3.33□□□□□ -1.88
PGBD1Q96JS3 SNORD58B-201ENST00000607313 66 ntBASIC3.33□□□□□ -1.88
PGBD1Q96JS3 AC107871.2-201ENST00000612894 502 ntBASIC3.33□□□□□ -1.88
PGBD1Q96JS3 AC087588.2-201ENST00000617667 426 ntBASIC3.33□□□□□ -1.88
PGBD1Q96JS3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.33□□□□□ -1.88
PGBD1Q96JS3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PGBD1Q96JS3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PGBD1Q96JS3 ZNF72P-201ENST00000425869 1908 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 AL365361.1-201ENST00000566942 3481 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 RNY3P11-201ENST00000364153 102 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 Y_RNA.314-201ENST00000365114 102 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 RNU1-115P-201ENST00000365329 160 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 RNU6-596P-201ENST00000365395 98 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 DEFB109C-201ENST00000382575 264 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 DEFB109B-201ENST00000382656 264 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 Y_RNA.389-201ENST00000383924 113 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 Y_RNA.455-201ENST00000384230 98 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 MIR521-1-201ENST00000384902 87 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 MIR23A-201ENST00000385245 73 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 RNU2-23P-201ENST00000410545 195 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 RN7SKP123-201ENST00000410732 291 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 BMS1P22-201ENST00000414726 313 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 TOMM20P4-201ENST00000427861 435 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 MTCYBP9-201ENST00000431021 303 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 SNRPEP9-201ENST00000436794 238 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.32□□□□□ -1.88
PGBD1Q96JS3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.32□□□□□ -1.88
PGBD1Q96JS3 HMGB1P12-201ENST00000438594 598 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 Z82210.1-201ENST00000440037 231 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.32□□□□□ -1.88
PGBD1Q96JS3 AL135938.1-201ENST00000443141 297 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 AP001486.1-201ENST00000463339 476 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 AC128713.1-201ENST00000471495 306 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 SUB1P3-201ENST00000564581 315 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.32□□□□□ -1.88
PGBD1Q96JS3 AC008121.1-201ENST00000603244 268 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 AC093732.2-201ENST00000607950 274 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 AC004832.5-201ENST00000608677 401 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 AC090115.4-201ENST00000609970 188 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 AL161629.2-201ENST00000615347 275 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PGBD1Q96JS3 AC090617.7-201ENST00000623952 126 ntBASIC3.32□□□□□ -1.88
PGBD1Q96JS3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PGBD1Q96JS3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PGBD1Q96JS3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.32□□□□□ -1.88
PGBD1Q96JS3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.32□□□□□ -1.88
PGBD1Q96JS3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
PGBD1Q96JS3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PGBD1Q96JS3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.31□□□□□ -1.88
PGBD1Q96JS3 Y_RNA.47-201ENST00000362697 108 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 RNU6-428P-201ENST00000362942 107 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 Y_RNA.153-201ENST00000363615 91 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 U8.8-201ENST00000365399 135 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 RNU6-140P-201ENST00000384566 108 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 RNA5SP129-201ENST00000410276 118 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.31□□□□□ -1.88
PGBD1Q96JS3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PGBD1Q96JS3 CHEK2P4-201ENST00000450340 246 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.31□□□□□ -1.88
PGBD1Q96JS3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.31□□□□□ -1.88
PGBD1Q96JS3 RPL17P19-201ENST00000489069 552 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 MTCO2P24-201ENST00000515611 426 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 RNA5SP468-201ENST00000516782 93 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 CASP1P1-201ENST00000526345 212 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.31□□□□□ -1.88
PGBD1Q96JS3 AC113195.1-201ENST00000579952 141 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 AL158827.2-201ENST00000602494 330 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 AC018889.1-201ENST00000605372 397 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 AL110115.1-201ENST00000614396 364 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 AL691447.3-201ENST00000635020 330 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 MIR6733-201ENST00000635723 61 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 U6.99-201ENST00000637524 83 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PGBD1Q96JS3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.31□□□□□ -1.88
PGBD1Q96JS3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PGBD1Q96JS3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PGBD1Q96JS3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PGBD1Q96JS3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PGBD1Q96JS3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.3□□□□□ -1.88
PGBD1Q96JS3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PGBD1Q96JS3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PGBD1Q96JS3 FTLP6-201ENST00000355274 422 ntBASIC3.3□□□□□ -1.88
PGBD1Q96JS3 RNY1P16-201ENST00000363063 111 ntBASIC3.3□□□□□ -1.88
PGBD1Q96JS3 RNU6-505P-201ENST00000384427 107 ntBASIC3.3□□□□□ -1.88
PGBD1Q96JS3 Y_RNA.533-201ENST00000384596 114 ntBASIC3.3□□□□□ -1.88
PGBD1Q96JS3 RNU6-1156P-201ENST00000410365 100 ntBASIC3.3□□□□□ -1.88
PGBD1Q96JS3 AL117339.3-201ENST00000418733 162 ntBASIC3.3□□□□□ -1.88
PGBD1Q96JS3 YPEL5P1-201ENST00000419731 367 ntBASIC3.3□□□□□ -1.88
PGBD1Q96JS3 COTL1P1-201ENST00000422309 375 ntBASIC3.3□□□□□ -1.88
PGBD1Q96JS3 NUP35P1-201ENST00000422734 947 ntBASIC3.3□□□□□ -1.88
PGBD1Q96JS3 AC099799.1-201ENST00000439809 192 ntBASIC3.3□□□□□ -1.88
PGBD1Q96JS3 AL078601.1-201ENST00000444542 271 ntBASIC3.3□□□□□ -1.88
PGBD1Q96JS3 U8.20-201ENST00000459445 131 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms