Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ELOCP31-201ENST00000540463 467 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 AC012493.2-201ENST00000595083 291 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 SNRPGP17-201ENST00000603780 214 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 uc_338.1-201ENST00000612113 180 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 uc_338.22-201ENST00000622722 187 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 AC008669.1-201ENST00000565823 2178 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS50Q96JG6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 Y_RNA.128-201ENST00000363391 112 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 Y_RNA.395-201ENST00000383945 109 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 RNU6-1040P-201ENST00000383974 107 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 Y_RNA.445-201ENST00000384168 102 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 RNU6-692P-201ENST00000384496 107 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 MIR559-201ENST00000385188 96 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 USMG5P1-201ENST00000425964 177 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 DAP3P1-201ENST00000441522 278 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 RNU7-23P-201ENST00000459465 62 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 RPL23AP49-201ENST00000492925 468 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 AP005902.1-201ENST00000521358 186 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 AP002404.1-201ENST00000532005 451 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 MIR4325-201ENST00000583049 90 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 AC005000.2-201ENST00000605468 310 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 AC004852.3-201ENST00000614131 326 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 AC110079.1-202ENST00000635213 138 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 MIR3199-2-201ENST00000636243 86 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 AC241585.2-209ENST00000638217 143 ntBASIC3.07□□□□□ -1.92
VPS50Q96JG6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VPS50Q96JG6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS50Q96JG6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS50Q96JG6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS50Q96JG6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS50Q96JG6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS50Q96JG6 Y_RNA.5-201ENST00000362334 102 ntBASIC3.06□□□□□ -1.92
VPS50Q96JG6 RNU6-1115P-201ENST00000362490 106 ntBASIC3.06□□□□□ -1.92
VPS50Q96JG6 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS50Q96JG6 MIR634-201ENST00000385208 97 ntBASIC3.06□□□□□ -1.92
VPS50Q96JG6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS50Q96JG6 Y_RNA.631-201ENST00000459607 101 ntBASIC3.06□□□□□ -1.92
VPS50Q96JG6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS50Q96JG6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS50Q96JG6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS50Q96JG6 SNORA31.18-201ENST00000517043 134 ntBASIC3.06□□□□□ -1.92
VPS50Q96JG6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS50Q96JG6 CBX3P8-201ENST00000532412 525 ntBASIC3.06□□□□□ -1.92
VPS50Q96JG6 AC108206.1-201ENST00000570186 4159 ntBASIC3.06□□□□□ -1.92
VPS50Q96JG6 MIR3200-201ENST00000580767 85 ntBASIC3.06□□□□□ -1.92
VPS50Q96JG6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS50Q96JG6 AC107871.2-201ENST00000612894 502 ntBASIC3.06□□□□□ -1.92
VPS50Q96JG6 AL162274.2-201ENST00000614406 332 ntBASIC3.06□□□□□ -1.92
VPS50Q96JG6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS50Q96JG6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
VPS50Q96JG6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS50Q96JG6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS50Q96JG6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS50Q96JG6 SNORD56.1-201ENST00000362913 68 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 SNORA63-201ENST00000363450 132 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 SNORD21-201ENST00000383953 95 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 Y_RNA.463-201ENST00000384271 102 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 Y_RNA.533-201ENST00000384596 114 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 NDUFB4P4-201ENST00000404822 243 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AL138885.1-201ENST00000405921 675 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 RNA5SP492-201ENST00000411330 114 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 PMCHL1-202ENST00000423102 261 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS50Q96JG6 AL161651.1-201ENST00000440882 223 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AC243964.1-201ENST00000441814 261 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AL137792.2-201ENST00000443484 235 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 GSTA11P-201ENST00000452866 669 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 U8.21-201ENST00000459536 136 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AC133134.1-201ENST00000466800 359 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS50Q96JG6 AC096576.1-201ENST00000489014 359 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 RNU6-470P-201ENST00000515954 104 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 ACA59.1-201ENST00000515966 143 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 RNA5SP76-201ENST00000516277 87 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 ACA59.2-201ENST00000517061 156 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AC009812.2-201ENST00000517657 457 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS50Q96JG6 AL158827.2-201ENST00000602494 330 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AC019159.1-201ENST00000605094 187 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 MIR8076-201ENST00000611401 83 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AC133104.2-201ENST00000615272 193 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 AL691447.3-201ENST00000635020 330 ntBASIC3.05□□□□□ -1.92
VPS50Q96JG6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 743.4 ms