Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RNU6-333P-201ENST00000459117 107 ntBASIC2.28□□□□□ -2.04
RFT1Q96AA3 RNU7-167P-201ENST00000459160 62 ntBASIC2.28□□□□□ -2.04
RFT1Q96AA3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.28□□□□□ -2.04
RFT1Q96AA3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.28□□□□□ -2.04
RFT1Q96AA3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.28□□□□□ -2.04
RFT1Q96AA3 Y_RNA.665-201ENST00000516177 98 ntBASIC2.28□□□□□ -2.04
RFT1Q96AA3 CKS1BP7-201ENST00000522230 235 ntBASIC2.28□□□□□ -2.04
RFT1Q96AA3 ANP32BP3-201ENST00000559213 706 ntBASIC2.28□□□□□ -2.04
RFT1Q96AA3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.28□□□□□ -2.04
RFT1Q96AA3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.28□□□□□ -2.04
RFT1Q96AA3 MIR4325-201ENST00000583049 90 ntBASIC2.28□□□□□ -2.04
RFT1Q96AA3 MIR5195-201ENST00000583555 115 ntBASIC2.28□□□□□ -2.04
RFT1Q96AA3 CTHRC1P1-201ENST00000605383 469 ntBASIC2.28□□□□□ -2.04
RFT1Q96AA3 AL442067.2-201ENST00000614033 363 ntBASIC2.28□□□□□ -2.04
RFT1Q96AA3 AC009248.2-201ENST00000619826 254 ntBASIC2.28□□□□□ -2.04
RFT1Q96AA3 U4.7-201ENST00000638126 106 ntBASIC2.28□□□□□ -2.04
RFT1Q96AA3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 RNU6-845P-201ENST00000362578 103 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 RNU4-73P-201ENST00000363164 141 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 Y_RNA.142-201ENST00000363491 102 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 RNU6-767P-201ENST00000384132 107 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 RNU1-57P-201ENST00000384491 166 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 SNORA44-201ENST00000384584 132 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 Y_RNA.535-201ENST00000384612 99 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RFT1Q96AA3 AL356057.3-201ENST00000402607 340 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 AL513185.2-201ENST00000425543 193 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 MTND4P28-201ENST00000426217 387 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 AL135938.1-201ENST00000443141 297 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 AC012308.1-201ENST00000451232 178 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 HIGD1AP13-201ENST00000509878 289 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 RNU6-1153P-201ENST00000516760 105 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 RNU6-1314P-201ENST00000517139 104 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RFT1Q96AA3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RFT1Q96AA3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 AC079600.2-201ENST00000550076 130 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 AC078814.3-201ENST00000553036 491 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.27□□□□□ -2.05
RFT1Q96AA3 AC073410.2-201ENST00000603240 332 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 RNU6-89P-201ENST00000606519 100 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 AL132765.2-201ENST00000610812 351 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RFT1Q96AA3 AC245884.12-201ENST00000615364 59 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 uc_338.34-201ENST00000617467 174 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 AL133216.2-202ENST00000634512 349 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 AC099654.5-201ENST00000636479 350 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.27□□□□□ -2.05
RFT1Q96AA3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RFT1Q96AA3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RFT1Q96AA3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RFT1Q96AA3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RFT1Q96AA3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RFT1Q96AA3 Y_RNA.72-201ENST00000362894 103 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 Y_RNA.157-201ENST00000363638 102 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 RNU6-266P-201ENST00000364225 107 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 Y_RNA.231-201ENST00000364358 102 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 Y_RNA.378-201ENST00000365652 113 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.26□□□□□ -2.05
RFT1Q96AA3 RNU6-831P-201ENST00000384548 107 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 MIR95-201ENST00000385072 81 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 RNA5SP118-201ENST00000410385 109 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 CYCSP48-201ENST00000417124 323 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.26□□□□□ -2.05
RFT1Q96AA3 MTND1P14-201ENST00000427400 950 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 IFNA11P-201ENST00000446352 526 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 snoU13.14-201ENST00000459372 104 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 RNU7-66P-201ENST00000459469 62 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 RPL38P4-201ENST00000502376 214 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 RNU4-29P-201ENST00000515943 174 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 SNORD60.2-201ENST00000516883 86 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.26□□□□□ -2.05
RFT1Q96AA3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.26□□□□□ -2.05
RFT1Q96AA3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.26□□□□□ -2.05
RFT1Q96AA3 MIR4795-201ENST00000584182 89 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.26□□□□□ -2.05
RFT1Q96AA3 AC011712.1-201ENST00000588959 234 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 AC002044.1-201ENST00000606707 158 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RFT1Q96AA3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.26□□□□□ -2.05
RFT1Q96AA3 AL121757.2-201ENST00000611223 313 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 U2.17-201ENST00000611454 95 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.26□□□□□ -2.05
RFT1Q96AA3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
RFT1Q96AA3 AC073346.2-201ENST00000624724 2058 ntBASIC2.26□□□□□ -2.05
RFT1Q96AA3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFT1Q96AA3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.25□□□□□ -2.05
RFT1Q96AA3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.25□□□□□ -2.05
RFT1Q96AA3 Y_RNA.58-201ENST00000362807 102 ntBASIC2.25□□□□□ -2.05
RFT1Q96AA3 Y_RNA.154-201ENST00000363624 102 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms