Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 SNORA59A-201ENST00000459326 152 ntBASIC4.78□□□□□ -1.64
CNKSR1Q969H4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.78□□□□□ -1.64
CNKSR1Q969H4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.78□□□□□ -1.64
CNKSR1Q969H4 LINC00933-203ENST00000559812 219 ntBASIC4.78□□□□□ -1.64
CNKSR1Q969H4 AL356157.2-201ENST00000605122 111 ntBASIC4.78□□□□□ -1.64
CNKSR1Q969H4 AC005000.2-201ENST00000605468 310 ntBASIC4.78□□□□□ -1.64
CNKSR1Q969H4 AC024581.2-201ENST00000619986 252 ntBASIC4.78□□□□□ -1.64
CNKSR1Q969H4 SNORA43.4-201ENST00000629559 138 ntBASIC4.78□□□□□ -1.64
CNKSR1Q969H4 snoU18.1-201ENST00000629629 71 ntBASIC4.78□□□□□ -1.64
CNKSR1Q969H4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.78□□□□□ -1.64
CNKSR1Q969H4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CNKSR1Q969H4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.78□□□□□ -1.64
CNKSR1Q969H4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNKSR1Q969H4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNKSR1Q969H4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNKSR1Q969H4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.77□□□□□ -1.65
CNKSR1Q969H4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNKSR1Q969H4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNKSR1Q969H4 Y_RNA.215-201ENST00000364204 112 ntBASIC4.77□□□□□ -1.65
CNKSR1Q969H4 RNU6-312P-201ENST00000364629 107 ntBASIC4.77□□□□□ -1.65
CNKSR1Q969H4 RNA5SP267-201ENST00000364893 126 ntBASIC4.77□□□□□ -1.65
CNKSR1Q969H4 SNORA40.19-201ENST00000390846 128 ntBASIC4.77□□□□□ -1.65
CNKSR1Q969H4 AC083863.1-201ENST00000438811 231 ntBASIC4.77□□□□□ -1.65
CNKSR1Q969H4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.77□□□□□ -1.65
CNKSR1Q969H4 RNU6-703P-201ENST00000516946 107 ntBASIC4.77□□□□□ -1.65
CNKSR1Q969H4 RNU6-1183P-201ENST00000517054 60 ntBASIC4.77□□□□□ -1.65
CNKSR1Q969H4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.77□□□□□ -1.65
CNKSR1Q969H4 AC244505.7-201ENST00000599675 272 ntBASIC4.77□□□□□ -1.65
CNKSR1Q969H4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.77□□□□□ -1.65
CNKSR1Q969H4 AC068831.7-201ENST00000616954 363 ntBASIC4.77□□□□□ -1.65
CNKSR1Q969H4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNKSR1Q969H4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.77□□□□□ -1.65
CNKSR1Q969H4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.77□□□□□ -1.65
CNKSR1Q969H4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 RNU6-942P-201ENST00000363002 107 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 SNORD115-8-201ENST00000363856 82 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 RNU6-335P-201ENST00000364563 113 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 SNORD115-38-201ENST00000365037 82 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 Z98749.2-208ENST00000381646 500 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 RNU6-658P-201ENST00000384606 106 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 MIR186-201ENST00000384988 86 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 MIR487A-201ENST00000385009 80 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 MIR708-201ENST00000390708 88 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 SNORA3C-201ENST00000408792 125 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 RNA5SP104-201ENST00000410989 118 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 RNA5SP39-201ENST00000411245 120 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 IFNA11P-201ENST00000446352 526 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 RPL32P34-201ENST00000486380 400 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 AC025445.1-201ENST00000502728 300 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 RNU6-191P-201ENST00000516295 94 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.76□□□□□ -1.65
CNKSR1Q969H4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNKSR1Q969H4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 AC118273.1-201ENST00000525324 3006 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 Y_RNA.7-201ENST00000362352 102 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 MIR518D-201ENST00000385014 87 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 MIR199A2-201ENST00000385289 110 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 ATP5A1P2-201ENST00000412323 255 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 AL358075.3-201ENST00000426289 226 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 AL512844.2-201ENST00000433990 593 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 AC005840.1-201ENST00000498412 377 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 HMGB1P22-201ENST00000505315 124 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 SNORA70.16-201ENST00000516390 95 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 AC022695.1-201ENST00000522089 237 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 RNU1-30P-201ENST00000606575 163 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 AC048347.1-201ENST00000624621 427 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 MIR6715B-201ENST00000637172 77 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.75□□□□□ -1.65
CNKSR1Q969H4 AL356489.2-201ENST00000566968 3528 ntBASIC4.75□□□□□ -1.65
CNKSR1Q969H4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNKSR1Q969H4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNKSR1Q969H4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CNKSR1Q969H4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNKSR1Q969H4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CNKSR1Q969H4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CNKSR1Q969H4 Y_RNA.23-201ENST00000362496 106 ntBASIC4.74□□□□□ -1.65
CNKSR1Q969H4 Y_RNA.238-201ENST00000364441 102 ntBASIC4.74□□□□□ -1.65
CNKSR1Q969H4 SNORA72.2-201ENST00000365028 127 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms