Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 Z98749.2-208ENST00000381646 500 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 SNORA1.3-201ENST00000384676 136 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 AL591034.2-201ENST00000402839 359 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 AL591034.1-201ENST00000407447 340 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 U3.37-201ENST00000408528 213 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 AC008267.5-201ENST00000424928 265 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 TRIAP1P1-201ENST00000427062 225 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.74□□□□□ -1.81
RTF1Q92541 AC068781.1-201ENST00000488231 618 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 AC114801.2-201ENST00000503825 781 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 RNA5SP356-201ENST00000515972 94 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 RN7SKP132-201ENST00000516001 208 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 RN7SKP43-201ENST00000516173 320 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.74□□□□□ -1.81
RTF1Q92541 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.74□□□□□ -1.81
RTF1Q92541 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.74□□□□□ -1.81
RTF1Q92541 BNIP3P16-201ENST00000589779 534 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 AC008737.2-201ENST00000599446 118 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 AC136443.5-201ENST00000603741 370 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 AP001836.1-201ENST00000604675 523 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 AC107294.3-201ENST00000609211 526 ntBASIC3.74□□□□□ -1.81
RTF1Q92541 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
RTF1Q92541 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.74□□□□□ -1.81
RTF1Q92541 AL079305.1-201ENST00000623159 3008 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RTF1Q92541 AL136164.4-201ENST00000625013 2135 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RTF1Q92541 Y_RNA.158-201ENST00000363651 101 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 Y_RNA.428-201ENST00000384078 102 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 RNU6-658P-201ENST00000384606 106 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 RPL21P3-201ENST00000395517 478 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 NDUFS5P4-201ENST00000412983 318 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 BX276092.3-201ENST00000424182 230 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.73□□□□□ -1.81
RTF1Q92541 AC099799.1-201ENST00000439809 192 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.73□□□□□ -1.81
RTF1Q92541 AC006026.2-201ENST00000457376 180 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 AC146507.2-201ENST00000460608 476 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 AC092185.1-201ENST00000491371 97 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 AK3P2-201ENST00000507976 429 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 RNU6-377P-201ENST00000515965 102 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 Y_RNA.661-201ENST00000516003 99 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 SNORD116.3-201ENST00000517176 78 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.73□□□□□ -1.81
RTF1Q92541 AC103996.1-201ENST00000555468 102 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.73□□□□□ -1.81
RTF1Q92541 MIR4273-201ENST00000582824 84 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RTF1Q92541 MIR3976-201ENST00000606807 139 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 AC005046.1-201ENST00000608515 625 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.73□□□□□ -1.81
RTF1Q92541 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.73□□□□□ -1.81
RTF1Q92541 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RTF1Q92541 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.72□□□□□ -1.81
RTF1Q92541 RNY1P14-201ENST00000384426 108 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 Y_RNA.496-201ENST00000384444 101 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 MIR518D-201ENST00000385014 87 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 MRPL42P3-201ENST00000401492 326 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 RPS29P13-201ENST00000402041 169 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.72□□□□□ -1.81
RTF1Q92541 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.72□□□□□ -1.81
RTF1Q92541 HIGD1AP2-201ENST00000446367 280 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.72□□□□□ -1.81
RTF1Q92541 RNA5SP310-201ENST00000459084 116 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 snoU109.2-201ENST00000459316 135 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.72□□□□□ -1.81
RTF1Q92541 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 AP004607.1-201ENST00000524456 203 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 VN1R107P-201ENST00000601784 209 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 MIR8076-201ENST00000611401 83 ntBASIC3.72□□□□□ -1.81
RTF1Q92541 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.72□□□□□ -1.81
RTF1Q92541 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RTF1Q92541 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RTF1Q92541 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
RTF1Q92541 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.71□□□□□ -1.81
RTF1Q92541 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RTF1Q92541 RNU6-78P-201ENST00000362897 107 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 Y_RNA.80-201ENST00000362996 102 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 RNU6-884P-201ENST00000363889 107 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 Y_RNA.364-201ENST00000365532 101 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 RPS4XP3-201ENST00000398541 413 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 MIR1289-1-201ENST00000408836 144 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 RN7SKP58-201ENST00000411010 305 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.71□□□□□ -1.82
RTF1Q92541 AL139281.1-201ENST00000422120 335 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 EIF4EP2-201ENST00000422816 654 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.71□□□□□ -1.82
RTF1Q92541 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.71□□□□□ -1.82
RTF1Q92541 AC098831.1-201ENST00000440661 216 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 BTF3P15-201ENST00000455606 336 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.71□□□□□ -1.82
RTF1Q92541 MTND5P22-201ENST00000458380 195 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 RPL17P19-201ENST00000489069 552 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 AC022447.4-201ENST00000504053 364 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 AC116655.1-201ENST00000508324 901 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.71□□□□□ -1.82
RTF1Q92541 Y_RNA.720-201ENST00000517166 92 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 RNA5SP380-201ENST00000517190 98 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms