Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 AL136164.4-201ENST00000625013 2135 ntBASIC3.13□□□□□ -1.91
ATG4AQ8WYN0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 RNA5SP295-201ENST00000362655 121 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 RNU6-595P-201ENST00000363944 107 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 RNU6-198P-201ENST00000384258 104 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 BTF3L4P2-201ENST00000392798 346 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 RNU6-985P-201ENST00000410182 104 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 AC005326.1-201ENST00000429197 123 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 RNU6-475P-201ENST00000516073 104 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 RNU6-581P-201ENST00000516214 105 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 RNU6-1046P-201ENST00000516538 107 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 MIR5701-3-201ENST00000578890 82 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 MIR5701-1-201ENST00000585138 82 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 MIR5701-2-201ENST00000615634 82 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 MIR7112-201ENST00000616126 65 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 AC091152.2-201ENST00000591628 2569 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 AC010680.1-201ENST00000590024 3590 ntBASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
ATG4AQ8WYN0 AC005592.1-201ENST00000566527 1640 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AL353743.1-202ENST00000431724 1695 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AC093908.1-201ENST00000623125 8092 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 MIR208A-201ENST00000362287 71 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 RNU6-858P-201ENST00000362436 107 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 Y_RNA.39-201ENST00000362620 98 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 Y_RNA.123-201ENST00000363338 102 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 RNA5SP387-201ENST00000364226 106 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 Y_RNA.314-201ENST00000365114 102 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 SNORA54-201ENST00000384281 123 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 SNORA48.8-201ENST00000391324 134 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 RNU6-1156P-201ENST00000410365 100 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 RNU2-23P-201ENST00000410545 195 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 RNU6-1245P-201ENST00000411130 106 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 MTND3P2-201ENST00000438452 342 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AC243964.1-201ENST00000441814 261 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AC015911.1-201ENST00000495111 156 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 RNU4-77P-201ENST00000516692 156 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 RNU7-4P-201ENST00000516961 62 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AC004584.2-201ENST00000570407 410 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 MIR7975-201ENST00000619350 68 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AC024581.2-201ENST00000619986 252 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AC006111.3-201ENST00000622137 383 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AL606534.2-204ENST00000635008 178 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 MIR3199-2-201ENST00000636243 86 ntBASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.11□□□□□ -1.91
ATG4AQ8WYN0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 AC008669.1-201ENST00000565823 2178 ntBASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 MIR181B1-201ENST00000385240 110 ntBASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 SNORA11.1-201ENST00000408133 129 ntBASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 AC074117.2-201ENST00000417130 397 ntBASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 RNU7-23P-201ENST00000459465 62 ntBASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 RPL30P10-201ENST00000488148 337 ntBASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 AC009163.5-201ENST00000575421 637 ntBASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 MIR5680-201ENST00000577577 84 ntBASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 AL162373.1-201ENST00000620433 407 ntBASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 MTND5P16-201ENST00000460269 1703 ntBASIC3.1□□□□□ -1.91
ATG4AQ8WYN0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 SNORD56.1-201ENST00000362913 68 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 Y_RNA.527-201ENST00000384573 102 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 MIR625-201ENST00000385047 85 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 MIR23A-201ENST00000385245 73 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 RNU6-700P-201ENST00000391043 107 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 AL356057.3-201ENST00000402607 340 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 MTCYBP10-201ENST00000424905 650 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 RPS15AP5-201ENST00000436276 388 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 MED28P2-201ENST00000475771 317 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 RNU6-764P-201ENST00000516396 105 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 IGHV3-76-201ENST00000522465 295 ntBASIC3.09□□□□□ -1.91
ATG4AQ8WYN0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms