Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL160275.3-201ENST00000423876 471 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 MTCO2P19-201ENST00000427513 598 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 FABP5P15-201ENST00000453566 214 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 MRPS17P3-201ENST00000465453 385 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC023194.1-201ENST00000493084 308 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC079140.3-201ENST00000511111 550 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 MIR892C-201ENST00000516410 77 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC087883.1-201ENST00000551882 391 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AGGF1P4-201ENST00000568249 801 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 MIR151B-201ENST00000584249 96 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AL121992.2-201ENST00000606262 256 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AL359851.1-201ENST00000569460 4997 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC006026.1-201ENST00000444025 1803 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 RNU6-348P-201ENST00000384386 107 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 Y_RNA.534-201ENST00000384599 112 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 SNORD23.1-201ENST00000408212 104 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 RNU6-1025P-201ENST00000410629 104 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC002486.1-201ENST00000435098 391 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 MTCO2P7-201ENST00000446518 666 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 TPT1P7-201ENST00000458300 517 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 RPS27P26-201ENST00000494583 239 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 RNU6-914P-201ENST00000516749 109 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC245505.1-201ENST00000556398 224 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 SUB1P2-201ENST00000556401 297 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 BNIP3P30-201ENST00000601184 574 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC068790.2-201ENST00000602601 557 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC012507.3-201ENST00000603556 477 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AL136363.2-201ENST00000604173 851 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC008121.3-201ENST00000618726 433 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 AC010889.1-201ENST00000566193 2666 ntBASIC1.48□□□□□ -2.17
SHROOM3Q8TF72 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 Y_RNA.30-201ENST00000362572 97 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RNU4-41P-201ENST00000364426 143 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 SNORA4.3-201ENST00000365564 137 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RNU6-1119P-201ENST00000384349 108 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RNU6-817P-201ENST00000391083 104 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 FTH1P15-201ENST00000406984 280 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 POLHP1-201ENST00000411806 470 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AC007098.1-201ENST00000420122 367 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 MTCYBP5-201ENST00000423752 1135 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 DLGAP5P1-201ENST00000430307 464 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 BTF3P15-201ENST00000455606 336 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AC112771.1-201ENST00000463581 102 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RNA5SP165-201ENST00000517142 115 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AC022880.1-201ENST00000534017 973 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AC087683.1-201ENST00000591187 441 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AL161798.1-201ENST00000604630 131 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 Z99129.1-201ENST00000612510 255 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AC099842.1-201ENST00000619919 596 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AL157786.1-207ENST00000627771 695 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 SEPT14P19-203ENST00000633205 211 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 OR5AK4P-201ENST00000635912 903 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 U6.114-201ENST00000636407 96 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 NACAP2-201ENST00000318548 624 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RNU6-942P-201ENST00000363002 107 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 Y_RNA.255-201ENST00000364581 97 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RNU6-658P-201ENST00000384606 106 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 DEFB108C-201ENST00000400154 252 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RNU2-32P-201ENST00000411193 191 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RNU6-387P-201ENST00000411331 105 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AL031779.1-201ENST00000415663 330 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RPL21P90-201ENST00000415692 466 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms