Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 AL591043.1-201ENST00000432461 424 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 AL603825.1-201ENST00000438481 80 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 NIPA2P5-201ENST00000452282 464 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 RNA5SP24-201ENST00000516478 95 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 RNU6-612P-201ENST00000516909 102 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 Y_RNA.711-201ENST00000516993 102 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 AC022634.1-201ENST00000520765 532 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 AP005902.1-201ENST00000521358 186 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 ELOCP31-201ENST00000540463 467 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 AC021739.1-201ENST00000559631 174 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 HMGN2P15-201ENST00000585707 270 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 VN1R107P-201ENST00000601784 209 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 AC005046.1-201ENST00000608515 625 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 MIR8076-201ENST00000611401 83 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 AP006437.1-201ENST00000641440 3685 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 RNU6-490P-201ENST00000362985 107 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 Y_RNA.112-201ENST00000363250 102 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 U8.8-201ENST00000365399 135 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 SNORA41-201ENST00000384675 132 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 RPS29P13-201ENST00000402041 169 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 AL591034.2-201ENST00000402839 359 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 RNU6-174P-201ENST00000410406 106 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 BMS1P22-201ENST00000414726 313 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 AL137792.2-201ENST00000443484 235 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 AL513328.1-201ENST00000446460 224 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 AC012308.1-201ENST00000451232 178 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 AL163540.1-201ENST00000485382 386 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 RNU6-988P-201ENST00000519081 107 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 AC138627.2-201ENST00000624202 601 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 AC064859.1-201ENST00000624741 174 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 AC007256.1-201ENST00000392253 2765 ntBASIC3.72□□□□□ -1.81
SMC1BQ8NDV3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.71□□□□□ -1.81
SMC1BQ8NDV3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SMC1BQ8NDV3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 RNU6-858P-201ENST00000362436 107 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 RNU6-1115P-201ENST00000362490 106 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 RNU6-942P-201ENST00000363002 107 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 U8.2-201ENST00000363156 134 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 Y_RNA.132-201ENST00000363421 102 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 RNU6-105P-201ENST00000363909 104 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 RNU6-692P-201ENST00000384496 107 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 RNU7-23P-201ENST00000459465 62 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 RPS4XP22-201ENST00000480755 780 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 AC022493.2-201ENST00000506122 481 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 SNORA31.1-201ENST00000515993 133 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 SNORA31.5-201ENST00000516190 133 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 AC006504.6-201ENST00000590142 199 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 uc_338.1-201ENST00000612113 180 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 AC243829.7-201ENST00000633081 225 ntBASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMC1BQ8NDV3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 MIR22-201ENST00000362190 85 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 SNORD116-20-201ENST00000384529 92 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 RNU6-55P-201ENST00000411092 107 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 BX276092.3-201ENST00000424182 230 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 HMGN2P20-201ENST00000437531 273 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 AC011816.1-201ENST00000441346 546 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 AL357552.1-201ENST00000445254 415 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 AL035666.1-201ENST00000446195 348 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 RPL23AP67-201ENST00000465341 474 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 HMGN2P13-201ENST00000476476 274 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 AC068781.1-201ENST00000488231 618 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 AC116655.1-201ENST00000508324 901 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 AC010265.1-201ENST00000513509 211 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 SNORA70.19-201ENST00000516717 90 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 SNORA31.18-201ENST00000517043 134 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 IGHV3-76-201ENST00000522465 295 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms