Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC087441.2-201ENST00000529141 262 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AC084364.2-201ENST00000546924 395 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AC018714.1-201ENST00000605028 208 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AL031775.1-201ENST00000607014 887 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 AC010608.3-201ENST00000625048 527 ntBASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ZIC4Q8N9L1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
ZIC4Q8N9L1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 RNU6-501P-201ENST00000364072 100 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 RNU6-1222P-201ENST00000384615 107 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 MIR558-201ENST00000384920 94 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 RNU6-955P-201ENST00000410497 104 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 RNU6-387P-201ENST00000411331 105 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 RPL21P90-201ENST00000415692 466 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AC106883.1-201ENST00000418805 562 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AC007969.2-201ENST00000441891 191 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AL590365.1-201ENST00000450788 243 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 DUXAP8-207ENST00000456786 622 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AC132942.1-201ENST00000486753 483 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AC021146.2-201ENST00000504736 556 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 TPT1P8-201ENST00000510120 555 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AC025465.3-201ENST00000510570 311 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AF131216.2-201ENST00000512316 564 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 COPS8P3-201ENST00000526024 482 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 MIR4422-201ENST00000581938 83 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AC005786.1-201ENST00000588553 154 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
ZIC4Q8N9L1 RNU1-62P-201ENST00000362599 164 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 RNU6-527P-201ENST00000363425 104 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 RNU6-371P-201ENST00000364283 108 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 MIR150-201ENST00000385048 84 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 MTCYBP36-201ENST00000404146 440 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 Y_RNA.608-201ENST00000410647 95 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 RNU6-1245P-201ENST00000411130 106 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 MTCO2P8-201ENST00000412213 658 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 EEF1A1P40-201ENST00000412883 573 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 AL008987.1-201ENST00000415528 237 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 AC007283.2-201ENST00000424739 197 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 RPS29P23-201ENST00000458635 123 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 snoU13.9-201ENST00000458927 103 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 AC034244.1-201ENST00000507687 207 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 MTATP6P9-201ENST00000515039 680 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 RNU1-86P-201ENST00000516108 154 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 RNU1-107P-201ENST00000516617 154 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 RNA5SP490-201ENST00000517141 136 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 AL356057.1-201ENST00000533798 831 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 SUB1P3-201ENST00000564581 315 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 MIR3169-201ENST00000578032 83 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 RMST_4.1-201ENST00000616886 107 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 AL590240.4-201ENST00000616908 390 ntBASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
ZIC4Q8N9L1 RNU4-1-201ENST00000363925 141 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 RNU6-439P-201ENST00000384188 106 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 MIR544A-201ENST00000384855 91 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AC114801.2-201ENST00000503825 781 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 RBBP4P6-201ENST00000508098 202 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 SNORA31.17-201ENST00000516953 127 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 MTND2P7-201ENST00000521337 640 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AP005597.4-201ENST00000526762 229 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AP003181.2-201ENST00000528941 181 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AP002453.2-201ENST00000533503 320 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AC008521.1-201ENST00000587471 187 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AC018889.1-201ENST00000605372 397 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AC105129.3-201ENST00000605455 485 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 TUSC7.1-201ENST00000610969 165 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AC092140.2-201ENST00000618027 521 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 AL161722.3-201ENST00000605789 2983 ntBASIC1.13□□□□□ -2.23
ZIC4Q8N9L1 LINC02555-201ENST00000563933 1951 ntBASIC1.12□□□□□ -2.23
ZIC4Q8N9L1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.12□□□□□ -2.23
ZIC4Q8N9L1 AC106754.1-201ENST00000562632 1513 ntBASIC1.12□□□□□ -2.23
ZIC4Q8N9L1 RNU5F-6P-201ENST00000362979 116 ntBASIC1.12□□□□□ -2.23
ZIC4Q8N9L1 RNU6-179P-201ENST00000363350 107 ntBASIC1.12□□□□□ -2.23
ZIC4Q8N9L1 RNY1P12-201ENST00000364251 105 ntBASIC1.12□□□□□ -2.23
ZIC4Q8N9L1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms