Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 MIR2053-201ENST00000459295 91 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 FTH1P2-201ENST00000466086 412 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 SNORA25.11-201ENST00000515935 105 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 RNU6-1271P-201ENST00000517049 105 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 AP005902.1-201ENST00000521358 186 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 CKS1BP7-201ENST00000522230 235 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 AC007458.1-201ENST00000542812 373 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 AC008739.3-201ENST00000603262 127 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 AL157817.1-201ENST00000614264 790 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.18□□□□□ -1.9
KRT78Q8N1N4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.18□□□□□ -1.9
KRT78Q8N1N4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC092435.3-201ENST00000565538 3654 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 Z75746.1-201ENST00000440243 2080 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 RNU6-486P-201ENST00000363116 107 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 Y_RNA.112-201ENST00000363250 102 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 RNU6-1188P-201ENST00000363795 107 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 Y_RNA.557-201ENST00000384680 107 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC006946.1-201ENST00000429106 328 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 DAP3P1-201ENST00000441522 278 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC243964.1-201ENST00000441814 261 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 Y_RNA.653-201ENST00000459091 95 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AP001025.1-201ENST00000486139 332 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC009812.2-201ENST00000517657 457 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC073410.2-201ENST00000603240 332 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AL162713.1-201ENST00000604480 262 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC073657.2-201ENST00000605661 303 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC004832.5-201ENST00000608677 401 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC083806.3-201ENST00000614016 455 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 AC002543.1-201ENST00000299783 1954 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 MTND5P19-201ENST00000424872 1794 ntBASIC3.17□□□□□ -1.9
KRT78Q8N1N4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
KRT78Q8N1N4 MTND5P10-201ENST00000603719 1809 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 FAM35CP-201ENST00000554755 2470 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 RNU6-227P-201ENST00000362865 103 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 RNU1-33P-201ENST00000364249 162 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 RNU6-593P-201ENST00000364716 112 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 RNU6-702P-201ENST00000364982 107 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 SNORA63.7-201ENST00000365579 123 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 RNU6-622P-201ENST00000384272 103 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 RNU6-601P-201ENST00000384540 107 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 MT-TG-201ENST00000387429 68 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 MIR1302-3-201ENST00000408128 138 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 RN7SKP158-201ENST00000410453 326 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 RNU6-1140P-201ENST00000410517 106 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 Y_RNA.618-201ENST00000410949 107 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AC097463.2-201ENST00000421074 142 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AL353705.1-201ENST00000433468 480 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AC007969.2-201ENST00000441891 191 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 ELOCP24-201ENST00000456370 334 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 RN7SL442P-201ENST00000473804 320 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AC116337.1-201ENST00000509680 687 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 RNU6-1016P-201ENST00000516689 94 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AL109918.3-201ENST00000603072 338 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 MIR3976-201ENST00000606807 139 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AC019176.2-201ENST00000611579 315 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 AC073476.4-201ENST00000628409 72 ntBASIC3.16□□□□□ -1.9
KRT78Q8N1N4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRT78Q8N1N4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms