| HOOK3 | Q86VS8 | AC073415.1-201 | ENST00000449240 | 153 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC013470.1-201 | ENST00000453438 | 462 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AL353752.1-201 | ENST00000454946 | 260 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC087664.2-201 | ENST00000522898 | 551 nt | TSL 4 BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC124290.1-202 | ENST00000523342 | 387 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC090124.2-201 | ENST00000527727 | 563 nt | TSL 4 BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC022880.1-201 | ENST00000534017 | 973 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AP000763.2-201 | ENST00000540641 | 163 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | MIR5002-201 | ENST00000584713 | 97 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC002984.1-201 | ENST00000591692 | 448 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC245008.1-201 | ENST00000608123 | 476 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC022202.1-201 | ENST00000613515 | 211 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC011124.2-201 | ENST00000518739 | 3222 nt | TSL 1 (best) BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | RNA5SP126-201 | ENST00000365092 | 109 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | SNORD116-2-201 | ENST00000384274 | 95 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | SNORD116-6-201 | ENST00000384711 | 96 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | SNORA46.1-201 | ENST00000391069 | 153 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | RNU6-1158P-201 | ENST00000391167 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC003985.1-201 | ENST00000414127 | 362 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AL353193.1-201 | ENST00000421444 | 268 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AL356320.1-201 | ENST00000429616 | 163 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | LINC01650-201 | ENST00000438093 | 602 nt | TSL 2 BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | PSPHP1-201 | ENST00000450062 | 261 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | LINC00395-202 | ENST00000451570 | 415 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC055764.1-201 | ENST00000454526 | 473 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | RNA5SP233-201 | ENST00000459153 | 113 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | RNU7-167P-201 | ENST00000459160 | 62 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | RNU7-180P-201 | ENST00000459240 | 63 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AL163973.1-201 | ENST00000484753 | 577 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC010255.2-201 | ENST00000505209 | 428 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | ANXA2P1-201 | ENST00000505539 | 926 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | MTND2P33-201 | ENST00000506452 | 1031 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | NAF1-205 | ENST00000509434 | 385 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | LIAS-206 | ENST00000513731 | 826 nt | TSL 5 BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | RNU4ATAC8P-201 | ENST00000516196 | 109 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | COPS8P3-201 | ENST00000526024 | 482 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC133480.1-201 | ENST00000547563 | 381 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC005154.1-222 | ENST00000579024 | 341 nt | TSL 5 BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | BNIP3P16-201 | ENST00000589779 | 534 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC004223.2-201 | ENST00000590309 | 544 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC013412.1-201 | ENST00000610687 | 192 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC005858.4-201 | ENST00000623191 | 700 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AL359851.1-201 | ENST00000569460 | 4997 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AL354685.2-201 | ENST00000448218 | 1447 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | CFHR4-202 | ENST00000367416 | 2178 nt | APPRIS P1 TSL 2 BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | CGGBP1-202 | ENST00000398392 | 5298 nt | APPRIS P1 BASIC | 2.23 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | SLITRK6-201 | ENST00000400286 | 4318 nt | APPRIS P1 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | U8.2-201 | ENST00000363156 | 134 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | RNU6-336P-201 | ENST00000364891 | 107 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | MIR221-201 | ENST00000385135 | 110 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | TRDJ2-201 | ENST00000390475 | 54 nt | APPRIS P1 BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | RNU4-55P-201 | ENST00000410731 | 137 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | RNU2-32P-201 | ENST00000411193 | 191 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AL162725.2-201 | ENST00000430545 | 748 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC243964.1-201 | ENST00000441814 | 261 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AL122001.1-201 | ENST00000457027 | 370 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC055731.1-201 | ENST00000474387 | 401 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | RNU6-667P-201 | ENST00000517186 | 102 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC107953.1-201 | ENST00000522216 | 297 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC115990.1-201 | ENST00000526957 | 301 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AP003392.2-201 | ENST00000527269 | 208 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC018630.3-201 | ENST00000542637 | 96 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AP001363.1-201 | ENST00000544108 | 264 nt | TSL 3 BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC025575.1-201 | ENST00000548497 | 544 nt | TSL 4 BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC091544.4-201 | ENST00000555268 | 342 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | PWRN1-205 | ENST00000565295 | 465 nt | TSL 3 BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC026271.5-201 | ENST00000577873 | 130 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | MIR5583-1-201 | ENST00000580941 | 59 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | PIGPP4-201 | ENST00000584447 | 307 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AL031274.2-201 | ENST00000599419 | 203 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | VN1R107P-201 | ENST00000601784 | 209 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | AC012507.3-201 | ENST00000603556 | 477 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | Z82243.1-201 | ENST00000609432 | 473 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | U2.17-201 | ENST00000611454 | 95 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | ZBED5-202 | ENST00000432999 | 2741 nt | APPRIS P1 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | OR8K3-204 | ENST00000641689 | 2380 nt | APPRIS P1 BASIC | 2.22 | □□□□□ -2.05 | | |
| HOOK3 | Q86VS8 | CEP57L1-223 | ENST00000523787 | 2522 nt | APPRIS ALT2 TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | snoU2_19.1-201 | ENST00000362361 | 80 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | U3.13-201 | ENST00000364804 | 214 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | RNU6-546P-201 | ENST00000383991 | 107 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | HMGN2P39-201 | ENST00000398005 | 273 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | RNU2-48P-201 | ENST00000410694 | 191 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | RNU6-293P-201 | ENST00000411259 | 106 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AL589987.2-201 | ENST00000417426 | 582 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AL117339.3-201 | ENST00000418733 | 162 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AL359636.3-201 | ENST00000439471 | 301 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AL136987.2-201 | ENST00000457321 | 684 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AC107032.1-201 | ENST00000485945 | 480 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AC016556.1-201 | ENST00000510004 | 935 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | RNU2-19P-201 | ENST00000517288 | 84 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AC108449.1-202 | ENST00000517632 | 478 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AC069113.1-201 | ENST00000517763 | 267 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AC091047.1-201 | ENST00000533344 | 552 nt | TSL 4 BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AP003034.1-201 | ENST00000534621 | 422 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | MIR4529-201 | ENST00000578110 | 78 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | NBR2-204 | ENST00000587322 | 63 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | SNRPGP17-201 | ENST00000603780 | 214 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AC009314.1-201 | ENST00000603871 | 304 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AL354950.2-201 | ENST00000617939 | 290 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AC098657.3-201 | ENST00000620434 | 263 nt | BASIC | 2.21 | □□□□□ -2.06 | | |