Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU1-100P-201ENST00000365255 165 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 SNORD116-11-201ENST00000383882 92 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 RNU6-72P-201ENST00000384285 79 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 RNA5SP210-201ENST00000391034 120 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 U3.37-201ENST00000408528 213 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AC103975.1-201ENST00000482506 483 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 RN7SL283P-201ENST00000489055 303 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 RPL39P5-202ENST00000512505 151 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AC105029.1-201ENST00000520250 669 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AC104576.1-201ENST00000524225 88 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AC021739.1-201ENST00000559631 174 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 MIR4790-201ENST00000577799 79 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AC023043.2-201ENST00000589678 1026 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AC020895.1-201ENST00000595362 272 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AL138726.1-201ENST00000614873 333 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 Z69720.2-201ENST00000624755 279 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 SCARNA4-202ENST00000625402 129 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 AC010680.1-201ENST00000590024 3590 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 RNU5E-7P-201ENST00000365290 117 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 Y_RNA.529-201ENST00000384586 119 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 SNORD73A-201ENST00000386062 65 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 RN7SKP123-201ENST00000410732 291 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 SNAP23P1-201ENST00000433229 246 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 RPS15AP5-201ENST00000436276 388 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 HMGN2P10-201ENST00000448085 265 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 AC006026.2-201ENST00000457376 180 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 MTCO1P29-201ENST00000496868 288 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 AC008526.1-201ENST00000509149 338 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 RNU6-581P-201ENST00000516214 105 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 SNORD59.2-201ENST00000516873 68 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 RNA5SP454-201ENST00000517231 127 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 AL121821.2-201ENST00000556081 394 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 AC007151.1-201ENST00000572774 483 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 RPS3AP23-202ENST00000574601 686 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 MIR6134-201ENST00000617606 109 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 MIR1291-201ENST00000627649 87 ntBASIC3.29□□□□□ -1.88
KRT28Q7Z3Y7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 RNU6-797P-201ENST00000363101 109 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 SNORA14A-201ENST00000364773 135 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 SAR1AP2-201ENST00000392696 594 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AC074085.1-201ENST00000413598 418 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AC107399.1-201ENST00000451226 265 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 HMGN2P23-201ENST00000456759 269 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AC096745.1-201ENST00000509945 370 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 RN7SKP282-201ENST00000516824 299 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AP004607.1-201ENST00000524456 203 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 COPS8P3-201ENST00000526024 482 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AP005597.4-201ENST00000526762 229 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AP000787.2-201ENST00000604432 568 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AC011890.2-201ENST00000613393 294 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AL353997.5-201ENST00000618886 171 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AL359697.1-201ENST00000624879 587 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
KRT28Q7Z3Y7 AC091564.4-201ENST00000533934 2194 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 RNU6-858P-201ENST00000362436 107 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 RNU6-1329P-201ENST00000365664 107 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 MIR518D-201ENST00000385014 87 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 MIR548F5-201ENST00000408421 86 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 SNORD56-201ENST00000413522 71 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 UBE2V1P4-201ENST00000425374 344 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 MTND3P23-201ENST00000431980 347 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 AC092001.1-201ENST00000453012 261 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 RPS27P27-201ENST00000498779 255 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 AC092436.3-201ENST00000511788 257 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 RNU6-377P-201ENST00000515965 102 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 Y_RNA.675-201ENST00000516389 149 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 SNORA31.26-201ENST00000517250 137 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 AC109479.2-201ENST00000517842 174 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 AC100830.2-201ENST00000581636 240 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms