Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
BHLHA9Q7RTU4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 MIR148B-201ENST00000362252 99 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 Y_RNA.71-201ENST00000362892 104 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 Y_RNA.292-201ENST00000364904 97 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 RNU6-102P-201ENST00000384485 104 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 Y_RNA.526-201ENST00000384572 110 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 RNU6-550P-201ENST00000391057 101 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 UBA52P6-201ENST00000399822 382 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 TMSB4XP8-201ENST00000402089 135 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 RNU6-174P-201ENST00000410406 106 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 RPL19P1-201ENST00000411635 428 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 TMSB4XP6-201ENST00000415187 135 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 RPLP0P7-201ENST00000416050 667 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 TMSB4XP1-201ENST00000424567 135 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 PTGES3P4-201ENST00000426243 356 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 AC093156.1-201ENST00000440382 670 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 RPL23AP14-201ENST00000468281 468 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 SNRPGP3-201ENST00000469405 227 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 COX6CP14-201ENST00000469580 174 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 AC010469.2-201ENST00000496412 480 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 RPL23AP55-201ENST00000498163 452 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 AC092436.3-201ENST00000511788 257 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 RNU6-307P-201ENST00000516743 106 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 AC068657.1-201ENST00000520807 306 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 AC100870.1-201ENST00000522035 505 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 H3F3AP1-201ENST00000559984 334 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 ZNF192P1-203ENST00000565888 810 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 MIR3186-201ENST00000577404 85 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 SNORD39.3-201ENST00000584451 71 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 Y_RNA.802-201ENST00000614892 130 ntBASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
BHLHA9Q7RTU4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
BHLHA9Q7RTU4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.92
BHLHA9Q7RTU4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 Y_RNA.151-201ENST00000363566 112 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 RNU6-641P-201ENST00000384006 107 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 Y_RNA.581-201ENST00000391017 97 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 MTCYBP2-201ENST00000407745 171 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 TOMM22P1-201ENST00000418578 312 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 AC091390.3-201ENST00000426478 338 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 RPL23AP31-201ENST00000456160 467 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 SEPT14P8-201ENST00000508026 178 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 EIF4BP1-201ENST00000554881 351 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 SULT1C2P1-202ENST00000562418 459 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 MIR4308-201ENST00000580634 81 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 AL451007.1-201ENST00000595491 289 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 AL359881.1-201ENST00000602916 267 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 AC174048.1-201ENST00000603389 144 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 AC245517.5-201ENST00000611529 162 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 AC025034.2-201ENST00000623264 286 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 GABRG2-229ENST00000641017 3628 ntBASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.08□□□□□ -1.92
BHLHA9Q7RTU4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 RNU6-525P-201ENST00000363685 104 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 RNU6-263P-201ENST00000363811 107 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 RNU6-188P-201ENST00000364207 107 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 Y_RNA.272-201ENST00000364696 102 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 Y_RNA.343-201ENST00000365354 112 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 Y_RNA.400-201ENST00000383963 111 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 MIR569-201ENST00000385228 96 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 AL031679.1-201ENST00000400616 525 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 AL024474.1-201ENST00000404655 591 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 MTND3P9-201ENST00000429526 346 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 UQCRHP3-201ENST00000451503 251 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 RN7SL75P-201ENST00000461926 281 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 RPL21P8-201ENST00000465083 535 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 RPS4XP13-201ENST00000483219 789 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 RNY3P16-201ENST00000516338 101 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 RNU6-1234P-201ENST00000516877 103 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 RNU6-971P-201ENST00000516920 106 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 AC245166.1-201ENST00000521012 253 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 AP004371.1-201ENST00000525240 214 ntBASIC3.07□□□□□ -1.92
BHLHA9Q7RTU4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms