Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RPL19P1-201ENST00000411635 428 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 RPL21P2-201ENST00000440049 481 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 AC079354.2-201ENST00000453523 154 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 Y_RNA.635-201ENST00000459041 101 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 RPL30P1-201ENST00000488676 339 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 Y_RNA.670-201ENST00000516255 105 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 AC113139.1-201ENST00000605049 239 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 AC099654.5-201ENST00000636479 350 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 RNU4-35P-201ENST00000362588 141 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 SNORD46.1-201ENST00000364139 104 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 RNU6-790P-201ENST00000384479 105 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 SNORD116-29-201ENST00000384516 83 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 MIR521-1-201ENST00000384902 87 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 SNORA26.7-201ENST00000391288 122 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 Y_RNA.594-201ENST00000410373 140 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 RNU6-174P-201ENST00000410406 106 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 RN7SKP61-201ENST00000410642 295 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 BMS1P22-201ENST00000414726 313 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 RPL32P35-201ENST00000415214 394 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 Z82205.1-201ENST00000428456 297 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 RNU7-26P-201ENST00000458980 63 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 RN7SL75P-201ENST00000461926 281 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 RNU1-54P-201ENST00000517181 120 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 AL138963.2-201ENST00000605137 226 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 HMGB1P24-202ENST00000615653 685 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 MTND5P19-201ENST00000424872 1794 ntBASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PPP4R4Q6NUP7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 KPNA2P1-201ENST00000458289 1591 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 RNU6-784P-201ENST00000384330 106 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 SNORA26.3-201ENST00000391119 136 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 SNORA11.1-201ENST00000408133 129 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 AC236972.1-201ENST00000433225 199 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 RN7SL293P-201ENST00000481765 281 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 RNU6-1213P-201ENST00000517075 94 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 AC115990.1-201ENST00000526957 301 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 APOOP3-201ENST00000536787 586 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 AC093249.1-201ENST00000567049 203 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 MTCO3P13-201ENST00000577757 781 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 AP000654.2-201ENST00000605633 586 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PPP4R4Q6NUP7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 SNORA63.1-201ENST00000362493 131 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 RNU6-596P-201ENST00000365395 98 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 Y_RNA.404-201ENST00000383978 102 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 RNU6-933P-201ENST00000384424 107 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 RNU6-370P-201ENST00000411008 104 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 AC115115.1-201ENST00000449927 248 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 SNRPGP7-201ENST00000469016 106 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 SNORA31.16-201ENST00000516773 139 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 FRG2DP-202ENST00000566967 323 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 MIR4795-201ENST00000584182 89 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 AL078605.1-201ENST00000603529 500 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 AL162713.1-201ENST00000604480 262 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 AC018889.1-201ENST00000605372 397 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 AC009229.3-201ENST00000608056 282 ntBASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.13□□□□□ -1.91
PPP4R4Q6NUP7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 AC009541.1-201ENST00000438279 2662 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 Y_RNA.123-201ENST00000363338 102 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 RNU6-1188P-201ENST00000363795 107 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 U3.13-201ENST00000364804 214 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 RNA5SP240-201ENST00000365355 128 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 SNORA36A-201ENST00000384221 132 ntBASIC3.12□□□□□ -1.91
PPP4R4Q6NUP7 SNORA46-201ENST00000384762 135 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms