Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 SNORA51-201ENST00000606420 132 ntBASIC3.39□□□□□ -1.87
LSM12Q3MHD2 AC107294.1-201ENST00000609524 467 ntBASIC3.39□□□□□ -1.87
LSM12Q3MHD2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM12Q3MHD2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
LSM12Q3MHD2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LSM12Q3MHD2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.39□□□□□ -1.87
LSM12Q3MHD2 AL079305.1-201ENST00000623159 3008 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 OR4G2P-202ENST00000641004 1759 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 RNA5SP295-201ENST00000362655 121 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 RNU6-704P-201ENST00000364162 103 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 Y_RNA.286-201ENST00000364813 102 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 RNY1P5-201ENST00000383890 115 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 MIR591-201ENST00000385290 95 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 Y_RNA.623-201ENST00000411128 95 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 AL451074.5-201ENST00000415894 435 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 AL358453.1-201ENST00000422522 250 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 MTCO1P39-201ENST00000426148 480 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 RPL23AP82-202ENST00000427528 469 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 HMGN1P18-201ENST00000457642 277 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 CENPBD1P1-201ENST00000464061 469 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 AL049874.1-201ENST00000489560 388 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 AK3P2-201ENST00000507976 429 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 RNA5SP380-201ENST00000517190 98 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 CASP1P1-201ENST00000526345 212 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 AL121603.1-201ENST00000553815 142 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 AC005476.1-201ENST00000554427 397 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 HSPE1P5-201ENST00000561489 272 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 RN7SL703P-201ENST00000578485 302 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 AC060766.3-201ENST00000591442 263 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 Z83818.1-201ENST00000603584 150 ntBASIC3.38□□□□□ -1.87
LSM12Q3MHD2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM12Q3MHD2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 Y_RNA.44-201ENST00000362676 108 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 Y_RNA.122-201ENST00000363331 96 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 Y_RNA.123-201ENST00000363338 102 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 SNORA7.2-201ENST00000364446 145 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 RNU6-740P-201ENST00000364734 105 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 MIR514A1-201ENST00000385133 98 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 MIR613-201ENST00000385248 95 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 RPS29P7-201ENST00000439662 171 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 RPL21P104-201ENST00000464143 478 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 TOMM22P6-201ENST00000465035 409 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 SEPT14P8-201ENST00000508026 178 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AC026402.1-201ENST00000513642 170 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 RNU7-200P-201ENST00000516105 62 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 Y_RNA.706-201ENST00000516933 99 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 MIR2355-201ENST00000517199 87 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AC109479.2-201ENST00000517842 174 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AC107934.2-201ENST00000518653 310 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AC104027.1-201ENST00000521887 300 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 MIR548AI-201ENST00000579940 88 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 MIR4697-201ENST00000582977 78 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AC010928.2-201ENST00000588017 287 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AC008121.1-201ENST00000603244 268 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AC004832.4-201ENST00000608952 331 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 AC116096.1-201ENST00000566804 2314 ntBASIC3.37□□□□□ -1.87
LSM12Q3MHD2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM12Q3MHD2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM12Q3MHD2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LSM12Q3MHD2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LSM12Q3MHD2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LSM12Q3MHD2 RNU6-858P-201ENST00000362436 107 ntBASIC3.36□□□□□ -1.87
LSM12Q3MHD2 RNU6-222P-201ENST00000362438 107 ntBASIC3.36□□□□□ -1.87
LSM12Q3MHD2 RNU6-227P-201ENST00000362865 103 ntBASIC3.36□□□□□ -1.87
LSM12Q3MHD2 Y_RNA.292-201ENST00000364904 97 ntBASIC3.36□□□□□ -1.87
LSM12Q3MHD2 RNU6-1074P-201ENST00000383995 104 ntBASIC3.36□□□□□ -1.87
LSM12Q3MHD2 SNORD63-201ENST00000384262 68 ntBASIC3.36□□□□□ -1.87
LSM12Q3MHD2 Y_RNA.504-201ENST00000384481 104 ntBASIC3.36□□□□□ -1.87
LSM12Q3MHD2 MIR10A-201ENST00000385043 110 ntBASIC3.36□□□□□ -1.87
LSM12Q3MHD2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LSM12Q3MHD2 RNU6-837P-201ENST00000391056 108 ntBASIC3.36□□□□□ -1.87
LSM12Q3MHD2 AL627311.1-201ENST00000431514 115 ntBASIC3.36□□□□□ -1.87
LSM12Q3MHD2 AC091390.1-201ENST00000433904 331 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms