Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 MIR561-201ENST00000385216 97 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 MIR100-201ENST00000385259 80 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AL590084.2-201ENST00000401481 382 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 MIR1262-201ENST00000408276 93 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 MIR1283-2-201ENST00000408621 87 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 MTCYBP5-201ENST00000423752 1135 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC008267.5-201ENST00000424928 265 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 RPS24P1-201ENST00000438550 371 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 SNRPGP12-201ENST00000449481 213 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 RPL18AP17-201ENST00000455326 198 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CACNA1EQ15878 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 RNA5SP57-201ENST00000459463 123 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 RNU7-140P-201ENST00000459546 60 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC108729.1-201ENST00000487812 947 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 MTND2P33-201ENST00000506452 1031 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC118282.2-201ENST00000508739 374 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC109445.1-201ENST00000512356 383 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC074344.1-201ENST00000512823 224 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 RNU6-1183P-201ENST00000517054 60 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 RNU6-1028P-201ENST00000517164 93 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC068587.4-201ENST00000533893 186 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 AP000403.1-201ENST00000603349 851 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC010900.2-201ENST00000604508 210 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC239868.4-201ENST00000608318 671 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC124016.2-201ENST00000610058 665 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC104073.3-201ENST00000610942 955 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AL512506.1-201ENST00000613918 449 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC099786.3-201ENST00000565735 1410 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CACNA1EQ15878 Y_RNA.48-201ENST00000362710 103 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 RNU6-78P-201ENST00000362897 107 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 Y_RNA.192-201ENST00000363977 102 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 U6.112-201ENST00000384129 70 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 SNORD14D-201ENST00000384390 87 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 MIR506-201ENST00000384998 124 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 RNU6-750P-201ENST00000390946 107 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 MIR1185-1-201ENST00000408598 86 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 RNU2-39P-201ENST00000410604 198 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 MTCYBP38-201ENST00000417160 1123 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC104651.1-201ENST00000427559 735 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AL627311.1-201ENST00000431514 115 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC002542.1-201ENST00000440683 193 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 AF186996.7-201ENST00000492781 209 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC103996.1-201ENST00000555468 102 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 MIR4293-201ENST00000584305 78 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 BNIP3P27-201ENST00000599991 412 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC021171.1-201ENST00000603137 706 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC108747.1-201ENST00000609508 535 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AL354696.1-201ENST00000614652 497 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 MIR6134-201ENST00000617606 109 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AC073968.1-201ENST00000618594 637 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 AP002782.1-201ENST00000623107 614 ntBASIC0.38□□□□□ -2.35
CACNA1EQ15878 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.38□□□□□ -2.35
CACNA1EQ15878 RNU6-28P-201ENST00000362378 107 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 Y_RNA.185-201ENST00000363894 100 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 RNU6-188P-201ENST00000364207 107 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CACNA1EQ15878 RNU6-883P-201ENST00000384597 107 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 RNU6-910P-201ENST00000390844 107 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 RNU2-23P-201ENST00000410545 195 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.37□□□□□ -2.35
CACNA1EQ15878 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.37□□□□□ -2.35
CACNA1EQ15878 AC099677.2-201ENST00000436385 175 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 AC005094.1-201ENST00000440420 368 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.37□□□□□ -2.35
CACNA1EQ15878 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.37□□□□□ -2.35
CACNA1EQ15878 PRELID3BP1-201ENST00000457142 540 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 AL162395.1-201ENST00000457882 422 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 AC119751.4-201ENST00000507498 357 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 RNU6-165P-201ENST00000517170 99 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 MTND2P7-201ENST00000521337 640 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 AC021451.1-201ENST00000523498 1129 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 OR8K2P-201ENST00000524645 927 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.37□□□□□ -2.35
CACNA1EQ15878 AC005832.3-201ENST00000537929 631 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 CYP3A52P-201ENST00000563326 91 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 BNIP3P31-201ENST00000604515 566 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 AC009237.15-201ENST00000610252 501 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 AL590240.4-201ENST00000616908 390 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 AL359314.1-201ENST00000616913 261 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 AC097372.5-201ENST00000623665 376 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 AC099654.8-201ENST00000637757 681 ntBASIC0.37□□□□□ -2.35
CACNA1EQ15878 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.37□□□□□ -2.35
CACNA1EQ15878 AL079343.1-201ENST00000572358 1771 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms