Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC012314.7-201ENST00000619693 93 ntBASIC3.79□□□□□ -1.8
SSRP1Q08945 MIR4272-201ENST00000635924 64 ntBASIC3.79□□□□□ -1.8
SSRP1Q08945 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSRP1Q08945 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSRP1Q08945 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.78□□□□□ -1.8
SSRP1Q08945 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSRP1Q08945 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSRP1Q08945 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSRP1Q08945 RNU4-9P-201ENST00000364951 139 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 RNU6-1286P-201ENST00000383871 107 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 Y_RNA.527-201ENST00000384573 102 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SSRP1Q08945 RNA5SP229-201ENST00000410809 99 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 AC112492.4-201ENST00000456549 352 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 AL136097.1-201ENST00000456945 913 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.78□□□□□ -1.8
SSRP1Q08945 RNU7-175P-201ENST00000515915 61 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 SNORD59.2-201ENST00000516873 68 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 Y_RNA.721-201ENST00000517207 102 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.78□□□□□ -1.8
SSRP1Q08945 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.78□□□□□ -1.8
SSRP1Q08945 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.78□□□□□ -1.8
SSRP1Q08945 MRPS36P4-201ENST00000534436 298 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 AC016256.1-201ENST00000547971 354 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.78□□□□□ -1.8
SSRP1Q08945 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.78□□□□□ -1.8
SSRP1Q08945 HSBP1P1-201ENST00000555205 166 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.78□□□□□ -1.8
SSRP1Q08945 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.78□□□□□ -1.8
SSRP1Q08945 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.78□□□□□ -1.8
SSRP1Q08945 AL161756.2-201ENST00000604597 246 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 RNU6-91P-201ENST00000607774 107 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 AC084757.4-201ENST00000616350 526 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 MIR7975-201ENST00000619350 68 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 SCARNA4-201ENST00000629045 128 ntBASIC3.78□□□□□ -1.8
SSRP1Q08945 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
SSRP1Q08945 RNU1-105P-201ENST00000363470 161 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 RNU6-142P-201ENST00000384019 107 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 MIR147B-201ENST00000390185 80 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 SNORA12.2-201ENST00000391040 156 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 Y_RNA.645-201ENST00000391229 102 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 Y_RNA.605-201ENST00000410577 105 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.77□□□□□ -1.81
SSRP1Q08945 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.77□□□□□ -1.81
SSRP1Q08945 AL358453.1-201ENST00000422522 250 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.77□□□□□ -1.81
SSRP1Q08945 MTCO3P29-201ENST00000432119 779 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 AC115115.1-201ENST00000449927 248 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 SNRPGP7-201ENST00000469016 106 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 RN7SL442P-201ENST00000473804 320 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 AC104564.1-201ENST00000493028 407 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 RNU6-1046P-201ENST00000516538 107 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 RNU6-1231P-201ENST00000517185 103 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 AC104027.1-201ENST00000521887 300 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 HSPE1P4-201ENST00000550617 308 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 AL391813.1-201ENST00000603098 260 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 AC073657.2-201ENST00000605661 303 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 AC100812.1-201ENST00000607622 580 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 AC087588.2-201ENST00000617667 426 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 AC073476.4-201ENST00000628409 72 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 SNORA43.4-201ENST00000629559 138 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 AC091812.1-201ENST00000432235 1948 ntBASIC3.77□□□□□ -1.81
SSRP1Q08945 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSRP1Q08945 MTND5P1-201ENST00000445440 1375 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.76□□□□□ -1.81
SSRP1Q08945 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.76□□□□□ -1.81
SSRP1Q08945 Y_RNA.405-201ENST00000383979 100 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 Y_RNA.451-201ENST00000384200 100 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 Y_RNA.455-201ENST00000384230 98 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 Y_RNA.485-201ENST00000384395 102 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 Y_RNA.524-201ENST00000384564 100 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 Y_RNA.561-201ENST00000384694 100 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 MIR591-201ENST00000385290 95 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 MIR767-201ENST00000390228 109 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 RN7SKP61-201ENST00000410642 295 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 RPL39P29-201ENST00000447779 157 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 AL353705.4-201ENST00000449661 238 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 CHEK2P4-201ENST00000450340 246 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 AL049830.2-201ENST00000480072 201 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 AC016632.1-201ENST00000503994 196 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 SNORA40.14-201ENST00000516543 86 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 AC104695.3-201ENST00000604052 296 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 AC091903.1-201ENST00000624322 454 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 AC138305.3-201ENST00000624988 240 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SSRP1Q08945 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.76□□□□□ -1.81
SSRP1Q08945 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.76□□□□□ -1.81
SSRP1Q08945 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.76□□□□□ -1.81
SSRP1Q08945 MTND5P27-201ENST00000428871 1720 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 MTND5P16-201ENST00000460269 1703 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSRP1Q08945 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSRP1Q08945 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SSRP1Q08945 AC002543.1-201ENST00000299783 1954 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSRP1Q08945 RNY3P11-201ENST00000364153 102 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSRP1Q08945 Y_RNA.424-201ENST00000384063 103 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 Y_RNA.504-201ENST00000384481 104 ntBASIC3.75□□□□□ -1.81
SSRP1Q08945 SAR1AP2-201ENST00000392696 594 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms