Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC018630.3-201ENST00000542637 96 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC025678.1-201ENST00000567861 338 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 ROCK1P1-201ENST00000573767 549 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC107075.1-201ENST00000613695 314 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 MTND4P14-201ENST00000435799 1354 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU6-674P-201ENST00000363831 107 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU4-12P-201ENST00000365233 139 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 SNORD116-20-201ENST00000384529 92 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 MIR194-1-201ENST00000384892 85 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 MIR218-1-201ENST00000384999 110 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 MIR140-201ENST00000385282 100 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.1□□□□□ -2.39
COL7A1Q02388 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.1□□□□□ -2.39
COL7A1Q02388 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC244098.3-201ENST00000424803 96 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 RPS15AP10-201ENST00000432472 382 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 MTCYBP15-201ENST00000433123 1127 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AL392003.1-201ENST00000434394 243 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 MTND4LP10-201ENST00000435146 291 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC092170.1-201ENST00000440211 356 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC098831.1-201ENST00000440661 216 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC027119.1-201ENST00000440877 241 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 MTCO1P44-201ENST00000441935 243 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 MEMO1P3-201ENST00000459811 302 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC018868.1-201ENST00000491307 315 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.1□□□□□ -2.39
COL7A1Q02388 SNORA31.4-201ENST00000516049 129 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RNA5SP168-201ENST00000516642 112 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU6-551P-201ENST00000516661 103 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU6-902P-201ENST00000517212 91 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU6-840P-201ENST00000517275 65 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AK6P2-201ENST00000549020 471 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC124947.2-202ENST00000552735 133 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AL022067.1-201ENST00000602426 454 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 KATNBL1P5-201ENST00000605015 517 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AL022345.2-201ENST00000606307 135 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC009033.1-201ENST00000624279 431 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AL603839.4-201ENST00000624658 1005 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AL159972.1-201ENST00000625150 448 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 SNORA25.3-201ENST00000363205 127 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU6-853P-201ENST00000364306 107 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 Y_RNA.245-201ENST00000364493 95 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 SNORA72.2-201ENST00000365028 127 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU6-439P-201ENST00000384188 106 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU6-514P-201ENST00000384208 107 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 Y_RNA.490-201ENST00000384413 102 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU6-160P-201ENST00000384591 107 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 MIR514A1-201ENST00000385133 98 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU6-754P-201ENST00000391166 107 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AF228730.1-201ENST00000397972 663 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RPL21P111-201ENST00000418453 477 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 PPP1R11P2-201ENST00000423543 382 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.1□□□□□ -2.39
COL7A1Q02388 MTCO3P45-201ENST00000443036 613 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AL096829.2-201ENST00000446582 742 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC092685.1-201ENST00000447960 1243 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RPS26P48-201ENST00000491713 339 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC093677.1-201ENST00000514414 678 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RN7SKP88-201ENST00000516847 250 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC034114.1-201ENST00000520293 285 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.1□□□□□ -2.39
COL7A1Q02388 AC093519.1-201ENST00000566109 298 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 MIR4431-201ENST00000579990 94 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 MIR4441-201ENST00000582623 100 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC068790.6-201ENST00000602558 258 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC091152.3-201ENST00000604227 325 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AL161729.4-201ENST00000604650 476 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC079610.2-201ENST00000604818 690 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AF129408.1-201ENST00000608767 431 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.1□□□□□ -2.39
COL7A1Q02388 7SK.8-201ENST00000612110 250 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 AC093913.1-201ENST00000614178 329 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.1□□□□□ -2.39
COL7A1Q02388 7SK.11-201ENST00000615477 250 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 SEPT14P17-201ENST00000617978 177 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 7SK.13-201ENST00000622040 250 ntBASIC0.1□□□□□ -2.39
COL7A1Q02388 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.1□□□□□ -2.39
COL7A1Q02388 RNU6-858P-201ENST00000362436 107 ntBASIC0.09□□□□□ -2.39
COL7A1Q02388 RNU4-45P-201ENST00000365469 141 ntBASIC0.09□□□□□ -2.39
COL7A1Q02388 RNU6-26P-201ENST00000383985 107 ntBASIC0.09□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms