Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SNORD56.1-201ENST00000362913 68 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 Y_RNA.311-201ENST00000365068 96 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 Y_RNA.332-201ENST00000365271 113 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 RNU6-190P-201ENST00000384154 102 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 SNORA29-201ENST00000384183 140 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 SNORA25-201ENST00000384384 134 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 RN7SKP266-201ENST00000410232 287 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 HMGN1P14-201ENST00000412459 517 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 SNX2P2-201ENST00000424553 323 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 AL627311.1-201ENST00000431514 115 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 SNORD116-28-201ENST00000516123 91 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 RN7SKP265-201ENST00000516448 223 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.77□□□□□ -2.29
H3F3AP84243 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.77□□□□□ -2.29
H3F3AP84243 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.77□□□□□ -2.29
H3F3AP84243 AL512310.8-201ENST00000550183 120 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 AC008015.1-201ENST00000555505 465 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 VN1R107P-201ENST00000601784 209 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 AC136443.5-201ENST00000603741 370 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 AL159153.1-201ENST00000619688 317 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 AC027335.2-201ENST00000624030 375 ntBASIC0.77□□□□□ -2.29
H3F3AP84243 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
H3F3AP84243 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
H3F3AP84243 MIR412-201ENST00000362142 91 ntBASIC0.76□□□□□ -2.29
H3F3AP84243 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
H3F3AP84243 RNU11-5P-201ENST00000391216 129 ntBASIC0.76□□□□□ -2.29
H3F3AP84243 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.76□□□□□ -2.29
H3F3AP84243 LARP1BP3-201ENST00000437229 869 ntBASIC0.76□□□□□ -2.29
H3F3AP84243 PRPS1P1-201ENST00000445305 876 ntBASIC0.76□□□□□ -2.29
H3F3AP84243 MTCO3P27-201ENST00000514397 196 ntBASIC0.76□□□□□ -2.29
H3F3AP84243 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.76□□□□□ -2.29
H3F3AP84243 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.76□□□□□ -2.29
H3F3AP84243 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.76□□□□□ -2.29
H3F3AP84243 BNIP3P26-201ENST00000600827 554 ntBASIC0.76□□□□□ -2.29
H3F3AP84243 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
H3F3AP84243 AL391646.1-201ENST00000603860 190 ntBASIC0.76□□□□□ -2.29
H3F3AP84243 AC069114.2-201ENST00000604699 304 ntBASIC0.76□□□□□ -2.29
H3F3AP84243 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
H3F3AP84243 AL020996.3-201ENST00000606617 222 ntBASIC0.76□□□□□ -2.29
H3F3AP84243 SCARNA4-202ENST00000625402 129 ntBASIC0.76□□□□□ -2.29
H3F3AP84243 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.76□□□□□ -2.29
H3F3AP84243 OR4G2P-201ENST00000328113 903 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 SNORA18.2-201ENST00000383865 132 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 RNU6-331P-201ENST00000384724 107 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 RPS3AP36-201ENST00000398190 775 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.75□□□□□ -2.29
H3F3AP84243 ELOCP17-201ENST00000414751 326 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 ELOCP9-201ENST00000418624 239 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 TIMM9P1-201ENST00000436122 256 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.75□□□□□ -2.29
H3F3AP84243 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.75□□□□□ -2.29
H3F3AP84243 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.75□□□□□ -2.29
H3F3AP84243 AL122001.1-201ENST00000457027 370 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 AC006026.2-201ENST00000457376 180 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 snoU13.30-201ENST00000458951 104 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 AC134050.1-201ENST00000495088 933 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 AC119751.4-201ENST00000507498 357 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 AC005741.1-201ENST00000511094 432 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 AF131216.2-201ENST00000512316 564 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 Y_RNA.687-201ENST00000516558 91 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.75□□□□□ -2.29
H3F3AP84243 MTND3P13-201ENST00000574391 343 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 AC091135.1-201ENST00000585943 307 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 VN1R82P-201ENST00000601481 356 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 MTATP6P2-201ENST00000603319 678 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 AL365434.2-201ENST00000607979 234 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 AC131235.4-201ENST00000609288 620 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 MIR6504-201ENST00000613520 61 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.75□□□□□ -2.29
H3F3AP84243 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.75□□□□□ -2.29
H3F3AP84243 AC010615.1-201ENST00000594254 1764 ntBASIC0.75□□□□□ -2.29
H3F3AP84243 Y_RNA.164-201ENST00000363709 102 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
H3F3AP84243 RAP1BP3-201ENST00000407180 549 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 AC123900.1-201ENST00000420390 96 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 USP9YP11-201ENST00000427537 717 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
H3F3AP84243 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.74□□□□□ -2.29
H3F3AP84243 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.74□□□□□ -2.29
H3F3AP84243 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.74□□□□□ -2.29
H3F3AP84243 RNU5F-2P-201ENST00000516066 82 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 ACA64.5-201ENST00000516207 127 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 SCARNA16.2-201ENST00000516520 172 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 SNORA43.2-201ENST00000516652 128 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 RNA5SP481-201ENST00000516814 122 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 AC091163.3-201ENST00000518269 1144 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.74□□□□□ -2.29
H3F3AP84243 AL022345.2-201ENST00000606307 135 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 AL021879.1-201ENST00000611756 288 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.74□□□□□ -2.29
H3F3AP84243 FRG1KP-201ENST00000623592 341 ntBASIC0.74□□□□□ -2.29
H3F3AP84243 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.73□□□□□ -2.29
H3F3AP84243 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
H3F3AP84243 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
H3F3AP84243 SNORA4.1-201ENST00000364263 144 ntBASIC0.73□□□□□ -2.29
H3F3AP84243 SNORD114-22-201ENST00000365423 72 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms