Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AC115115.1-201ENST00000449927 248 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 UQCRHP3-201ENST00000451503 251 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.58□□□□□ -2
ERVFC1-1P60608 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.58□□□□□ -2
ERVFC1-1P60608 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.58□□□□□ -2
ERVFC1-1P60608 RNU6-377P-201ENST00000515965 102 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 RNU1-143P-201ENST00000516296 146 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 RNU6-1282P-201ENST00000516735 96 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 RNU6-56P-201ENST00000516986 93 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 RNU6-1271P-201ENST00000517049 105 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 RNU6-1183P-201ENST00000517054 60 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 RNU6-794P-201ENST00000517261 64 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.58□□□□□ -2
ERVFC1-1P60608 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.58□□□□□ -2
ERVFC1-1P60608 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.58□□□□□ -2
ERVFC1-1P60608 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.58□□□□□ -2
ERVFC1-1P60608 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.58□□□□□ -2
ERVFC1-1P60608 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.58□□□□□ -2
ERVFC1-1P60608 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 AC087499.8-201ENST00000578406 226 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 MIR3668-201ENST00000582138 75 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.58□□□□□ -2
ERVFC1-1P60608 VN1R91P-201ENST00000594377 169 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 RAC1P9-201ENST00000604990 392 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.58□□□□□ -2
ERVFC1-1P60608 U1.23-201ENST00000610293 146 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 RNU1-68P-201ENST00000615382 146 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 AL138825.1-201ENST00000618587 192 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 U1.39-201ENST00000621562 146 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.58□□□□□ -2
ERVFC1-1P60608 MIR6733-201ENST00000635723 61 ntBASIC2.58□□□□□ -2
ERVFC1-1P60608 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ERVFC1-1P60608 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ERVFC1-1P60608 AC080100.1-201ENST00000624239 5356 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.57□□□□□ -2
ERVFC1-1P60608 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.57□□□□□ -2
ERVFC1-1P60608 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ERVFC1-1P60608 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ERVFC1-1P60608 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ERVFC1-1P60608 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ERVFC1-1P60608 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ERVFC1-1P60608 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.57□□□□□ -2
ERVFC1-1P60608 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.57□□□□□ -2
ERVFC1-1P60608 Y_RNA.26-201ENST00000362539 101 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 SNORD46.1-201ENST00000364139 104 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 Y_RNA.214-201ENST00000364201 112 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 Y_RNA.222-201ENST00000364264 102 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 RNU6-472P-201ENST00000384299 107 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 SNORA46-201ENST00000384762 135 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
ERVFC1-1P60608 RNA5SP171-201ENST00000391071 115 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.57□□□□□ -2
ERVFC1-1P60608 ELOCP20-201ENST00000422460 345 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.57□□□□□ -2
ERVFC1-1P60608 AL591419.1-201ENST00000427423 339 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 YME1L1P1-201ENST00000429435 297 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.57□□□□□ -2
ERVFC1-1P60608 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.57□□□□□ -2
ERVFC1-1P60608 AC098831.1-201ENST00000440661 216 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.57□□□□□ -2
ERVFC1-1P60608 RPS3AP12-201ENST00000443616 753 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 AC073910.1-201ENST00000445047 438 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 OSTCP8-201ENST00000445117 448 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 PCNPP5-201ENST00000452246 481 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.57□□□□□ -2
ERVFC1-1P60608 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.57□□□□□ -2
ERVFC1-1P60608 RNA5SP76-201ENST00000516277 87 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 RNU1-103P-201ENST00000516502 125 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 SCARNA14-201ENST00000516903 136 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.57□□□□□ -2
ERVFC1-1P60608 MIR4782-201ENST00000577987 79 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 U2.1-201ENST00000618978 145 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 MIR8062-201ENST00000621515 85 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 AC039056.2-201ENST00000622261 511 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 AC027309.3-201ENST00000623419 351 ntBASIC2.57□□□□□ -2
ERVFC1-1P60608 AC092435.3-201ENST00000565538 3654 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
ERVFC1-1P60608 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
ERVFC1-1P60608 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.56□□□□□ -2
ERVFC1-1P60608 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ERVFC1-1P60608 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.56□□□□□ -2
ERVFC1-1P60608 RNU6-227P-201ENST00000362865 103 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 Y_RNA.152-201ENST00000363578 100 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 RNU6-105P-201ENST00000363909 104 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 RNU6-806P-201ENST00000365147 105 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 RNU6-784P-201ENST00000384330 106 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 Y_RNA.556-201ENST00000384677 113 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 RPL21P75-201ENST00000396599 483 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 RPL21P28-201ENST00000401418 483 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 MTCO3P29-201ENST00000432119 779 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.56□□□□□ -2
ERVFC1-1P60608 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 MTCO3P8-201ENST00000453691 755 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.56□□□□□ -2
ERVFC1-1P60608 RPL21P39-201ENST00000463605 483 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AC087190.1-201ENST00000484462 480 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 RPL30P10-201ENST00000488148 337 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AC093591.1-201ENST00000491435 481 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 RPL21P16-201ENST00000495531 483 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms