Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.42□□□□□ -2.02
CDH13P55290 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.42□□□□□ -2.02
CDH13P55290 AIMP1P2-201ENST00000425294 312 ntBASIC2.42□□□□□ -2.02
CDH13P55290 MRPS10P2-201ENST00000431226 381 ntBASIC2.42□□□□□ -2.02
CDH13P55290 AC236972.1-201ENST00000433225 199 ntBASIC2.42□□□□□ -2.02
CDH13P55290 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.42□□□□□ -2.02
CDH13P55290 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.42□□□□□ -2.02
CDH13P55290 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.42□□□□□ -2.02
CDH13P55290 RNU7-26P-201ENST00000458980 63 ntBASIC2.42□□□□□ -2.02
CDH13P55290 RNU6-1037P-201ENST00000459571 107 ntBASIC2.42□□□□□ -2.02
CDH13P55290 RPL30P12-201ENST00000474666 353 ntBASIC2.42□□□□□ -2.02
CDH13P55290 AC083904.1-201ENST00000487828 231 ntBASIC2.42□□□□□ -2.02
CDH13P55290 RPL30P1-201ENST00000488676 339 ntBASIC2.42□□□□□ -2.02
CDH13P55290 AC140059.1-201ENST00000489238 361 ntBASIC2.42□□□□□ -2.02
CDH13P55290 AF213884.2-201ENST00000510417 903 ntBASIC2.42□□□□□ -2.02
CDH13P55290 AP005597.4-201ENST00000526762 229 ntBASIC2.42□□□□□ -2.02
CDH13P55290 AC103996.1-201ENST00000555468 102 ntBASIC2.42□□□□□ -2.02
CDH13P55290 GTF3AP2-201ENST00000557014 266 ntBASIC2.42□□□□□ -2.02
CDH13P55290 LARP7P3-201ENST00000579888 337 ntBASIC2.42□□□□□ -2.02
CDH13P55290 AC100830.2-201ENST00000581636 240 ntBASIC2.42□□□□□ -2.02
CDH13P55290 AL713866.2-201ENST00000603579 219 ntBASIC2.42□□□□□ -2.02
CDH13P55290 AL138963.2-201ENST00000605137 226 ntBASIC2.42□□□□□ -2.02
CDH13P55290 AC104458.1-201ENST00000608243 463 ntBASIC2.42□□□□□ -2.02
CDH13P55290 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CDH13P55290 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.42□□□□□ -2.02
CDH13P55290 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDH13P55290 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDH13P55290 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CDH13P55290 Y_RNA.40-201ENST00000362645 93 ntBASIC2.41□□□□□ -2.02
CDH13P55290 RNA5SP393-201ENST00000363423 117 ntBASIC2.41□□□□□ -2.02
CDH13P55290 Y_RNA.157-201ENST00000363638 102 ntBASIC2.41□□□□□ -2.02
CDH13P55290 SNORD113-7-201ENST00000363762 77 ntBASIC2.41□□□□□ -2.02
CDH13P55290 RNA5SP456-201ENST00000364002 114 ntBASIC2.41□□□□□ -2.02
CDH13P55290 RNA5SP125-201ENST00000364843 120 ntBASIC2.41□□□□□ -2.02
CDH13P55290 RNU6-1329P-201ENST00000365664 107 ntBASIC2.41□□□□□ -2.02
CDH13P55290 Y_RNA.599-201ENST00000410489 109 ntBASIC2.41□□□□□ -2.02
CDH13P55290 Y_RNA.615-201ENST00000410769 117 ntBASIC2.41□□□□□ -2.02
CDH13P55290 Y_RNA.619-201ENST00000410951 90 ntBASIC2.41□□□□□ -2.02
CDH13P55290 ARL5AP4-201ENST00000430731 512 ntBASIC2.41□□□□□ -2.02
CDH13P55290 SNAP23P1-201ENST00000433229 246 ntBASIC2.41□□□□□ -2.02
CDH13P55290 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.41□□□□□ -2.02
CDH13P55290 AC025750.2-201ENST00000442609 450 ntBASIC2.41□□□□□ -2.02
CDH13P55290 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH13P55290 FGF7P6-202ENST00000451282 293 ntBASIC2.41□□□□□ -2.02
CDH13P55290 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH13P55290 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH13P55290 RNU6-718P-201ENST00000516166 105 ntBASIC2.41□□□□□ -2.02
CDH13P55290 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.41□□□□□ -2.02
CDH13P55290 AC092794.1-201ENST00000612734 582 ntBASIC2.41□□□□□ -2.02
CDH13P55290 FAM157A-202ENST00000615155 405 ntBASIC2.41□□□□□ -2.02
CDH13P55290 HMGB1P24-202ENST00000615653 685 ntBASIC2.41□□□□□ -2.02
CDH13P55290 U4atac.1-201ENST00000618345 95 ntBASIC2.41□□□□□ -2.02
CDH13P55290 AC008121.3-201ENST00000618726 433 ntBASIC2.41□□□□□ -2.02
CDH13P55290 AC006386.2-201ENST00000624491 75 ntBASIC2.41□□□□□ -2.02
CDH13P55290 AC012005.1-201ENST00000624575 75 ntBASIC2.41□□□□□ -2.02
CDH13P55290 AC241585.2-209ENST00000638217 143 ntBASIC2.41□□□□□ -2.02
CDH13P55290 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH13P55290 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CDH13P55290 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH13P55290 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.41□□□□□ -2.02
CDH13P55290 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
CDH13P55290 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH13P55290 RNU6-212P-201ENST00000362642 104 ntBASIC2.4□□□□□ -2.03
CDH13P55290 RNU6-254P-201ENST00000363377 107 ntBASIC2.4□□□□□ -2.03
CDH13P55290 RNU6-1285P-201ENST00000363480 105 ntBASIC2.4□□□□□ -2.03
CDH13P55290 RNU6-1141P-201ENST00000364520 107 ntBASIC2.4□□□□□ -2.03
CDH13P55290 Y_RNA.373-201ENST00000365600 103 ntBASIC2.4□□□□□ -2.03
CDH13P55290 RNU6-128P-201ENST00000383976 107 ntBASIC2.4□□□□□ -2.03
CDH13P55290 RNU6-214P-201ENST00000384130 107 ntBASIC2.4□□□□□ -2.03
CDH13P55290 MIR450B-201ENST00000401182 78 ntBASIC2.4□□□□□ -2.03
CDH13P55290 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH13P55290 ZNF885P-201ENST00000420174 1098 ntBASIC2.4□□□□□ -2.03
CDH13P55290 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH13P55290 AL161788.1-201ENST00000441805 169 ntBASIC2.4□□□□□ -2.03
CDH13P55290 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH13P55290 AC090515.1-201ENST00000465295 476 ntBASIC2.4□□□□□ -2.03
CDH13P55290 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH13P55290 FAM206BP-201ENST00000510179 541 ntBASIC2.4□□□□□ -2.03
CDH13P55290 IMMP1LP2-201ENST00000552954 492 ntBASIC2.4□□□□□ -2.03
CDH13P55290 EIF4BP1-201ENST00000554881 351 ntBASIC2.4□□□□□ -2.03
CDH13P55290 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH13P55290 AC107304.1-201ENST00000604229 296 ntBASIC2.4□□□□□ -2.03
CDH13P55290 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CDH13P55290 AC007014.2-201ENST00000615581 479 ntBASIC2.4□□□□□ -2.03
CDH13P55290 AC002553.4-201ENST00000616896 331 ntBASIC2.4□□□□□ -2.03
CDH13P55290 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH13P55290 AP000560.1-201ENST00000624150 1937 ntBASIC2.4□□□□□ -2.03
CDH13P55290 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDH13P55290 AC069528.2-201ENST00000624849 1991 ntBASIC2.4□□□□□ -2.03
CDH13P55290 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
CDH13P55290 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDH13P55290 MIR21-201ENST00000362134 72 ntBASIC2.39□□□□□ -2.03
CDH13P55290 SNORA38-201ENST00000363946 132 ntBASIC2.39□□□□□ -2.03
CDH13P55290 RNU1-51P-201ENST00000365345 176 ntBASIC2.39□□□□□ -2.03
CDH13P55290 RNU6-692P-201ENST00000384496 107 ntBASIC2.39□□□□□ -2.03
CDH13P55290 MIR27B-201ENST00000385129 97 ntBASIC2.39□□□□□ -2.03
CDH13P55290 SNORD73A-201ENST00000386062 65 ntBASIC2.39□□□□□ -2.03
CDH13P55290 AL445529.1-201ENST00000398713 389 ntBASIC2.39□□□□□ -2.03
CDH13P55290 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.39□□□□□ -2.03
CDH13P55290 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms