Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
RAB28P51157 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RAB28P51157 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
RAB28P51157 Y_RNA.3-201ENST00000362331 103 ntBASIC2.36□□□□□ -2.03
RAB28P51157 snoU2_19.1-201ENST00000362361 80 ntBASIC2.36□□□□□ -2.03
RAB28P51157 RNU1-23P-201ENST00000363361 144 ntBASIC2.36□□□□□ -2.03
RAB28P51157 SNORA67.1-201ENST00000364749 141 ntBASIC2.36□□□□□ -2.03
RAB28P51157 RNU1-148P-201ENST00000384472 162 ntBASIC2.36□□□□□ -2.03
RAB28P51157 SNORA41-201ENST00000384675 132 ntBASIC2.36□□□□□ -2.03
RAB28P51157 SNORD73A-201ENST00000386062 65 ntBASIC2.36□□□□□ -2.03
RAB28P51157 RPS29P13-201ENST00000402041 169 ntBASIC2.36□□□□□ -2.03
RAB28P51157 MTND3P21-201ENST00000433774 331 ntBASIC2.36□□□□□ -2.03
RAB28P51157 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.36□□□□□ -2.03
RAB28P51157 AL353752.1-201ENST00000454946 260 ntBASIC2.36□□□□□ -2.03
RAB28P51157 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.36□□□□□ -2.03
RAB28P51157 SNORD60.2-201ENST00000516883 86 ntBASIC2.36□□□□□ -2.03
RAB28P51157 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.36□□□□□ -2.03
RAB28P51157 AC004486.1-201ENST00000546846 233 ntBASIC2.36□□□□□ -2.03
RAB28P51157 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RAB28P51157 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
RAB28P51157 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RAB28P51157 RNU6-1274P-201ENST00000384557 107 ntBASIC2.35□□□□□ -2.03
RAB28P51157 MIR514A2-201ENST00000385131 88 ntBASIC2.35□□□□□ -2.03
RAB28P51157 MIR514A3-201ENST00000385132 88 ntBASIC2.35□□□□□ -2.03
RAB28P51157 MIR561-201ENST00000385216 97 ntBASIC2.35□□□□□ -2.03
RAB28P51157 ARL5AP1-201ENST00000418991 388 ntBASIC2.35□□□□□ -2.03
RAB28P51157 RNU6-1208P-201ENST00000459588 107 ntBASIC2.35□□□□□ -2.03
RAB28P51157 HMGB3P3-201ENST00000510526 400 ntBASIC2.35□□□□□ -2.03
RAB28P51157 Y_RNA.655-201ENST00000515919 96 ntBASIC2.35□□□□□ -2.03
RAB28P51157 RNU6-323P-201ENST00000521915 107 ntBASIC2.35□□□□□ -2.03
RAB28P51157 AC016957.1-201ENST00000534895 309 ntBASIC2.35□□□□□ -2.03
RAB28P51157 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.35□□□□□ -2.03
RAB28P51157 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.35□□□□□ -2.03
RAB28P51157 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.35□□□□□ -2.03
RAB28P51157 EIF1P4-201ENST00000572664 335 ntBASIC2.35□□□□□ -2.03
RAB28P51157 AC060766.3-201ENST00000591442 263 ntBASIC2.35□□□□□ -2.03
RAB28P51157 VN1R107P-201ENST00000601784 209 ntBASIC2.35□□□□□ -2.03
RAB28P51157 AL357078.3-201ENST00000607528 618 ntBASIC2.35□□□□□ -2.03
RAB28P51157 AC013412.1-201ENST00000610687 192 ntBASIC2.35□□□□□ -2.03
RAB28P51157 AL121757.2-201ENST00000611223 313 ntBASIC2.35□□□□□ -2.03
RAB28P51157 AC010297.1-201ENST00000623948 149 ntBASIC2.35□□□□□ -2.03
RAB28P51157 MIR1291-201ENST00000627649 87 ntBASIC2.35□□□□□ -2.03
RAB28P51157 AC068137.3-201ENST00000639191 341 ntBASIC2.35□□□□□ -2.03
RAB28P51157 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RAB28P51157 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
RAB28P51157 OR4G1P-203ENST00000641984 1631 ntBASIC2.35□□□□□ -2.03
RAB28P51157 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
RAB28P51157 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
RAB28P51157 Y_RNA.231-201ENST00000364358 102 ntBASIC2.34□□□□□ -2.03
RAB28P51157 MIR181A1-201ENST00000385026 110 ntBASIC2.34□□□□□ -2.03
RAB28P51157 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RAB28P51157 RNU6-908P-201ENST00000410160 94 ntBASIC2.34□□□□□ -2.03
RAB28P51157 AC009963.1-201ENST00000417265 157 ntBASIC2.34□□□□□ -2.03
RAB28P51157 IFNA11P-201ENST00000446352 526 ntBASIC2.34□□□□□ -2.03
RAB28P51157 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RAB28P51157 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.34□□□□□ -2.03
RAB28P51157 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB28P51157 RN7SL429P-201ENST00000479090 223 ntBASIC2.34□□□□□ -2.03
RAB28P51157 RN7SL489P-201ENST00000486185 223 ntBASIC2.34□□□□□ -2.03
RAB28P51157 RN7SL327P-201ENST00000488659 223 ntBASIC2.34□□□□□ -2.03
RAB28P51157 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.34□□□□□ -2.03
RAB28P51157 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.34□□□□□ -2.03
RAB28P51157 AC234781.5-201ENST00000508429 271 ntBASIC2.34□□□□□ -2.03
RAB28P51157 AC008413.1-201ENST00000511864 177 ntBASIC2.34□□□□□ -2.03
RAB28P51157 SNORA19.2-201ENST00000516013 114 ntBASIC2.34□□□□□ -2.03
RAB28P51157 RNA5SP24-201ENST00000516478 95 ntBASIC2.34□□□□□ -2.03
RAB28P51157 RNU6-1069P-201ENST00000516612 133 ntBASIC2.34□□□□□ -2.03
RAB28P51157 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.34□□□□□ -2.03
RAB28P51157 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.34□□□□□ -2.03
RAB28P51157 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB28P51157 CYCSP26-201ENST00000534107 320 ntBASIC2.34□□□□□ -2.03
RAB28P51157 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB28P51157 AL157687.1-201ENST00000554853 619 ntBASIC2.34□□□□□ -2.03
RAB28P51157 MIR4446-201ENST00000578505 67 ntBASIC2.34□□□□□ -2.03
RAB28P51157 MIR3670-2-201ENST00000582974 65 ntBASIC2.34□□□□□ -2.03
RAB28P51157 MIR3670-1-201ENST00000584160 65 ntBASIC2.34□□□□□ -2.03
RAB28P51157 MIR3670-3-201ENST00000584855 65 ntBASIC2.34□□□□□ -2.03
RAB28P51157 MIR3670-4-201ENST00000612260 65 ntBASIC2.34□□□□□ -2.03
RAB28P51157 RN7SL853P-201ENST00000617250 223 ntBASIC2.34□□□□□ -2.03
RAB28P51157 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
RAB28P51157 AC016717.2-201ENST00000609089 5141 ntBASIC2.34□□□□□ -2.04
RAB28P51157 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
RAB28P51157 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RAB28P51157 RNU6-43P-201ENST00000384302 107 ntBASIC2.33□□□□□ -2.04
RAB28P51157 SNORA67.4-201ENST00000384688 142 ntBASIC2.33□□□□□ -2.04
RAB28P51157 RNU6-1106P-201ENST00000390845 107 ntBASIC2.33□□□□□ -2.04
RAB28P51157 USP9YP27-201ENST00000418455 438 ntBASIC2.33□□□□□ -2.04
RAB28P51157 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.33□□□□□ -2.04
RAB28P51157 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.33□□□□□ -2.04
RAB28P51157 AP000705.1-201ENST00000454567 350 ntBASIC2.33□□□□□ -2.04
RAB28P51157 RPL38P4-201ENST00000502376 214 ntBASIC2.33□□□□□ -2.04
RAB28P51157 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.33□□□□□ -2.04
RAB28P51157 AC091435.1-201ENST00000505442 584 ntBASIC2.33□□□□□ -2.04
RAB28P51157 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.33□□□□□ -2.04
RAB28P51157 RNU5F-2P-201ENST00000516066 82 ntBASIC2.33□□□□□ -2.04
RAB28P51157 AC087854.1-201ENST00000519706 414 ntBASIC2.33□□□□□ -2.04
RAB28P51157 AC115990.1-201ENST00000526957 301 ntBASIC2.33□□□□□ -2.04
RAB28P51157 AC025423.5-201ENST00000550230 219 ntBASIC2.33□□□□□ -2.04
RAB28P51157 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.33□□□□□ -2.04
RAB28P51157 AC010525.2-201ENST00000590920 195 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms