Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.51□□□□□ -2.33
SRP9P49458 AL358072.1-201ENST00000604156 575 ntBASIC0.51□□□□□ -2.33
SRP9P49458 AP000654.2-201ENST00000605633 586 ntBASIC0.51□□□□□ -2.33
SRP9P49458 AL451064.1-201ENST00000607718 471 ntBASIC0.51□□□□□ -2.33
SRP9P49458 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.51□□□□□ -2.33
SRP9P49458 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.51□□□□□ -2.33
SRP9P49458 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.51□□□□□ -2.33
SRP9P49458 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
SRP9P49458 MIR6734-201ENST00000621166 68 ntBASIC0.51□□□□□ -2.33
SRP9P49458 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.51□□□□□ -2.33
SRP9P49458 AL442644.1-201ENST00000454390 3105 ntBASIC0.5□□□□□ -2.33
SRP9P49458 Y_RNA.116-201ENST00000363292 103 ntBASIC0.5□□□□□ -2.33
SRP9P49458 SNORA4.3-201ENST00000365564 137 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RNU6-1-201ENST00000383898 107 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RNU6-42P-201ENST00000384165 107 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RNU6-36P-201ENST00000384172 107 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RNU6-4P-201ENST00000384205 107 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RNU6-5P-201ENST00000384238 107 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RNU6-3P-201ENST00000384314 107 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RNU6-2-201ENST00000384627 107 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RNU6-9-201ENST00000384776 107 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RNU6-33P-201ENST00000384793 107 ntBASIC0.5□□□□□ -2.33
SRP9P49458 MIR518E-201ENST00000385252 88 ntBASIC0.5□□□□□ -2.33
SRP9P49458 UBE2V1P15-201ENST00000407776 448 ntBASIC0.5□□□□□ -2.33
SRP9P49458 AL357139.1-201ENST00000407792 426 ntBASIC0.5□□□□□ -2.33
SRP9P49458 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.5□□□□□ -2.33
SRP9P49458 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.5□□□□□ -2.33
SRP9P49458 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.5□□□□□ -2.33
SRP9P49458 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.5□□□□□ -2.33
SRP9P49458 RNU1-131P-201ENST00000458943 161 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RNU7-59P-201ENST00000459101 61 ntBASIC0.5□□□□□ -2.33
SRP9P49458 TRBVA-201ENST00000498804 316 ntBASIC0.5□□□□□ -2.33
SRP9P49458 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.5□□□□□ -2.33
SRP9P49458 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.5□□□□□ -2.33
SRP9P49458 MTCO3P15-201ENST00000526563 574 ntBASIC0.5□□□□□ -2.33
SRP9P49458 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.5□□□□□ -2.33
SRP9P49458 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.5□□□□□ -2.33
SRP9P49458 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.5□□□□□ -2.33
SRP9P49458 AC007363.1-201ENST00000604736 620 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RPL21P136-201ENST00000605378 396 ntBASIC0.5□□□□□ -2.33
SRP9P49458 RNU6-6P-201ENST00000606623 107 ntBASIC0.5□□□□□ -2.33
SRP9P49458 AL365204.3-201ENST00000612448 685 ntBASIC0.5□□□□□ -2.33
SRP9P49458 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.5□□□□□ -2.33
SRP9P49458 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
SRP9P49458 AC010615.1-201ENST00000594254 1764 ntBASIC0.5□□□□□ -2.33
SRP9P49458 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
SRP9P49458 SNORD114-24-201ENST00000365029 72 ntBASIC0.49□□□□□ -2.33
SRP9P49458 Y_RNA.332-201ENST00000365271 113 ntBASIC0.49□□□□□ -2.33
SRP9P49458 MIR301A-201ENST00000385261 86 ntBASIC0.49□□□□□ -2.33
SRP9P49458 RAP1BP3-201ENST00000407180 549 ntBASIC0.49□□□□□ -2.33
SRP9P49458 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.49□□□□□ -2.33
SRP9P49458 RPS26P5-201ENST00000418544 335 ntBASIC0.49□□□□□ -2.33
SRP9P49458 NDUFA5P4-201ENST00000436704 385 ntBASIC0.49□□□□□ -2.33
SRP9P49458 MTCO2P25-201ENST00000447065 681 ntBASIC0.49□□□□□ -2.33
SRP9P49458 RNU6-333P-201ENST00000459117 107 ntBASIC0.49□□□□□ -2.33
SRP9P49458 BET1P1-201ENST00000482276 359 ntBASIC0.49□□□□□ -2.33
SRP9P49458 SNORA70.22-201ENST00000517160 124 ntBASIC0.49□□□□□ -2.33
SRP9P49458 AC090142.3-201ENST00000519012 385 ntBASIC0.49□□□□□ -2.33
SRP9P49458 MTND1P36-201ENST00000522384 936 ntBASIC0.49□□□□□ -2.33
SRP9P49458 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.49□□□□□ -2.33
SRP9P49458 AL391001.1-201ENST00000602747 715 ntBASIC0.49□□□□□ -2.33
SRP9P49458 AC084824.5-201ENST00000612009 413 ntBASIC0.49□□□□□ -2.33
SRP9P49458 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.49□□□□□ -2.33
SRP9P49458 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.49□□□□□ -2.33
SRP9P49458 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SRP9P49458 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
SRP9P49458 SNORD116-20-201ENST00000384529 92 ntBASIC0.48□□□□□ -2.33
SRP9P49458 MIR19B1-201ENST00000384829 87 ntBASIC0.48□□□□□ -2.33
SRP9P49458 MIR194-1-201ENST00000384892 85 ntBASIC0.48□□□□□ -2.33
SRP9P49458 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SRP9P49458 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SRP9P49458 AC099677.2-201ENST00000436385 175 ntBASIC0.48□□□□□ -2.33
SRP9P49458 AL158053.1-201ENST00000441503 453 ntBASIC0.48□□□□□ -2.33
SRP9P49458 AL583843.1-201ENST00000456070 346 ntBASIC0.48□□□□□ -2.33
SRP9P49458 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.48□□□□□ -2.33
SRP9P49458 AC024589.1-201ENST00000512207 263 ntBASIC0.48□□□□□ -2.33
SRP9P49458 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.48□□□□□ -2.33
SRP9P49458 RNU6-1315P-201ENST00000517187 99 ntBASIC0.48□□□□□ -2.33
SRP9P49458 SUMO2P18-201ENST00000518873 252 ntBASIC0.48□□□□□ -2.33
SRP9P49458 AC021451.1-201ENST00000523498 1129 ntBASIC0.48□□□□□ -2.33
SRP9P49458 AC023934.1-201ENST00000574529 2389 ntBASIC0.48□□□□□ -2.33
SRP9P49458 RNY1P14-201ENST00000384426 108 ntBASIC0.47□□□□□ -2.33
SRP9P49458 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.47□□□□□ -2.33
SRP9P49458 AC083875.1-201ENST00000419509 405 ntBASIC0.47□□□□□ -2.33
SRP9P49458 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SRP9P49458 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
SRP9P49458 CR383656.8-201ENST00000549046 145 ntBASIC0.47□□□□□ -2.33
SRP9P49458 AC069114.2-201ENST00000604699 304 ntBASIC0.47□□□□□ -2.33
SRP9P49458 AC130324.3-201ENST00000614165 542 ntBASIC0.47□□□□□ -2.33
SRP9P49458 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.47□□□□□ -2.33
SRP9P49458 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
SRP9P49458 MIR340-201ENST00000362125 95 ntBASIC0.46□□□□□ -2.34
SRP9P49458 SNORA75B-201ENST00000384053 137 ntBASIC0.46□□□□□ -2.34
SRP9P49458 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.46□□□□□ -2.34
SRP9P49458 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.46□□□□□ -2.34
SRP9P49458 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.46□□□□□ -2.34
SRP9P49458 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.46□□□□□ -2.34
SRP9P49458 AC013262.1-201ENST00000426710 252 ntBASIC0.46□□□□□ -2.34
SRP9P49458 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.46□□□□□ -2.34
SRP9P49458 MTND2P30-201ENST00000456663 382 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms