Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.35□□□□□ -2.35
CKS2P33552 AL590556.1-201ENST00000423231 483 ntBASIC0.35□□□□□ -2.35
CKS2P33552 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.35□□□□□ -2.35
CKS2P33552 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.35□□□□□ -2.35
CKS2P33552 SNORA31.2-201ENST00000516019 134 ntBASIC0.35□□□□□ -2.35
CKS2P33552 RNU4-54P-201ENST00000516428 129 ntBASIC0.35□□□□□ -2.35
CKS2P33552 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.35□□□□□ -2.35
CKS2P33552 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.35□□□□□ -2.35
CKS2P33552 MIR3945-201ENST00000581853 98 ntBASIC0.35□□□□□ -2.35
CKS2P33552 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.35□□□□□ -2.35
CKS2P33552 BNIP3P16-201ENST00000589779 534 ntBASIC0.35□□□□□ -2.35
CKS2P33552 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.35□□□□□ -2.35
CKS2P33552 AC105148.1-201ENST00000604961 409 ntBASIC0.35□□□□□ -2.35
CKS2P33552 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.35□□□□□ -2.35
CKS2P33552 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.35□□□□□ -2.35
CKS2P33552 AC104465.1-201ENST00000611365 139 ntBASIC0.35□□□□□ -2.35
CKS2P33552 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.34□□□□□ -2.35
CKS2P33552 RNA5SP259-201ENST00000365541 109 ntBASIC0.34□□□□□ -2.36
CKS2P33552 RNU6-395P-201ENST00000365662 106 ntBASIC0.34□□□□□ -2.36
CKS2P33552 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
CKS2P33552 SNORA12-201ENST00000391162 147 ntBASIC0.34□□□□□ -2.36
CKS2P33552 Y_RNA.623-201ENST00000411128 95 ntBASIC0.34□□□□□ -2.36
CKS2P33552 AL591212.2-201ENST00000433923 257 ntBASIC0.34□□□□□ -2.36
CKS2P33552 SNRPEP7-201ENST00000438350 220 ntBASIC0.34□□□□□ -2.36
CKS2P33552 SNRPEP8-201ENST00000442866 260 ntBASIC0.34□□□□□ -2.36
CKS2P33552 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.34□□□□□ -2.36
CKS2P33552 AP000542.1-201ENST00000448473 371 ntBASIC0.34□□□□□ -2.36
CKS2P33552 ZNF886P-201ENST00000450781 723 ntBASIC0.34□□□□□ -2.36
CKS2P33552 MTND2P30-201ENST00000456663 382 ntBASIC0.34□□□□□ -2.36
CKS2P33552 AL163540.1-201ENST00000485382 386 ntBASIC0.34□□□□□ -2.36
CKS2P33552 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.34□□□□□ -2.36
CKS2P33552 MTND2P33-201ENST00000506452 1031 ntBASIC0.34□□□□□ -2.36
CKS2P33552 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.34□□□□□ -2.36
CKS2P33552 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.34□□□□□ -2.36
CKS2P33552 RPL23AP94-201ENST00000512518 302 ntBASIC0.34□□□□□ -2.36
CKS2P33552 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.34□□□□□ -2.36
CKS2P33552 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.34□□□□□ -2.36
CKS2P33552 BNIP3P6-201ENST00000549284 499 ntBASIC0.34□□□□□ -2.36
CKS2P33552 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.34□□□□□ -2.36
CKS2P33552 AC091135.1-201ENST00000585943 307 ntBASIC0.34□□□□□ -2.36
CKS2P33552 BNIP3P8-201ENST00000597863 560 ntBASIC0.34□□□□□ -2.36
CKS2P33552 AC022893.3-201ENST00000607665 437 ntBASIC0.34□□□□□ -2.36
CKS2P33552 AP001596.2-201ENST00000608410 312 ntBASIC0.34□□□□□ -2.36
CKS2P33552 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.34□□□□□ -2.36
CKS2P33552 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CKS2P33552 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CKS2P33552 MIR373-201ENST00000362273 69 ntBASIC0.33□□□□□ -2.36
CKS2P33552 RNU6-110P-201ENST00000384508 104 ntBASIC0.33□□□□□ -2.36
CKS2P33552 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.33□□□□□ -2.36
CKS2P33552 BTF3L4P1-201ENST00000413813 468 ntBASIC0.33□□□□□ -2.36
CKS2P33552 MRPS36P1-201ENST00000421291 307 ntBASIC0.33□□□□□ -2.36
CKS2P33552 AC244505.5-201ENST00000443639 207 ntBASIC0.33□□□□□ -2.36
CKS2P33552 ATP5J2P3-201ENST00000451550 258 ntBASIC0.33□□□□□ -2.36
CKS2P33552 RPS26P45-201ENST00000471748 340 ntBASIC0.33□□□□□ -2.36
CKS2P33552 AC108210.2-201ENST00000503681 201 ntBASIC0.33□□□□□ -2.36
CKS2P33552 MTCO3P28-201ENST00000513351 515 ntBASIC0.33□□□□□ -2.36
CKS2P33552 SNORA31.4-201ENST00000516049 129 ntBASIC0.33□□□□□ -2.36
CKS2P33552 SNORD79.1-201ENST00000516069 84 ntBASIC0.33□□□□□ -2.36
CKS2P33552 RNA5SP121-201ENST00000516537 101 ntBASIC0.33□□□□□ -2.36
CKS2P33552 RN7SKP219-201ENST00000516825 296 ntBASIC0.33□□□□□ -2.36
CKS2P33552 DEFB108E-201ENST00000524692 240 ntBASIC0.33□□□□□ -2.36
CKS2P33552 AC025423.5-201ENST00000550230 219 ntBASIC0.33□□□□□ -2.36
CKS2P33552 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.33□□□□□ -2.36
CKS2P33552 AL136363.2-201ENST00000604173 851 ntBASIC0.33□□□□□ -2.36
CKS2P33552 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.33□□□□□ -2.36
CKS2P33552 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.33□□□□□ -2.36
CKS2P33552 AC106858.1-201ENST00000637497 429 ntBASIC0.33□□□□□ -2.36
CKS2P33552 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CKS2P33552 AC023934.1-201ENST00000574529 2389 ntBASIC0.32□□□□□ -2.36
CKS2P33552 AL391994.1-201ENST00000254724 282 ntBASIC0.32□□□□□ -2.36
CKS2P33552 SNORA4.2-201ENST00000365313 147 ntBASIC0.32□□□□□ -2.36
CKS2P33552 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.32□□□□□ -2.36
CKS2P33552 RNU6-17P-201ENST00000384245 107 ntBASIC0.32□□□□□ -2.36
CKS2P33552 RNU6-18P-201ENST00000384527 107 ntBASIC0.32□□□□□ -2.36
CKS2P33552 ARL5AP1-201ENST00000418991 388 ntBASIC0.32□□□□□ -2.36
CKS2P33552 USP9YP14-201ENST00000430663 563 ntBASIC0.32□□□□□ -2.36
CKS2P33552 MTCO3P29-201ENST00000432119 779 ntBASIC0.32□□□□□ -2.36
CKS2P33552 AL122001.1-201ENST00000457027 370 ntBASIC0.32□□□□□ -2.36
CKS2P33552 RPL39P38-201ENST00000467018 153 ntBASIC0.32□□□□□ -2.36
CKS2P33552 AC048334.1-201ENST00000477975 159 ntBASIC0.32□□□□□ -2.36
CKS2P33552 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.32□□□□□ -2.36
CKS2P33552 ATP5EP1-201ENST00000510257 156 ntBASIC0.32□□□□□ -2.36
CKS2P33552 RNU5F-2P-201ENST00000516066 82 ntBASIC0.32□□□□□ -2.36
CKS2P33552 RNA5SP255-201ENST00000516370 107 ntBASIC0.32□□□□□ -2.36
CKS2P33552 DEFB108A-201ENST00000530110 222 ntBASIC0.32□□□□□ -2.36
CKS2P33552 MIR3912-201ENST00000577566 105 ntBASIC0.32□□□□□ -2.36
CKS2P33552 VN1R82P-201ENST00000601481 356 ntBASIC0.32□□□□□ -2.36
CKS2P33552 AC083806.3-201ENST00000614016 455 ntBASIC0.32□□□□□ -2.36
CKS2P33552 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.32□□□□□ -2.36
CKS2P33552 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.32□□□□□ -2.36
CKS2P33552 AC009541.1-201ENST00000438279 2662 ntBASIC0.31□□□□□ -2.36
CKS2P33552 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.31□□□□□ -2.36
CKS2P33552 Y_RNA.140-201ENST00000363474 103 ntBASIC0.31□□□□□ -2.36
CKS2P33552 Y_RNA.363-201ENST00000365529 113 ntBASIC0.31□□□□□ -2.36
CKS2P33552 MIR10B-201ENST00000385011 110 ntBASIC0.31□□□□□ -2.36
CKS2P33552 MIR764-201ENST00000390811 85 ntBASIC0.31□□□□□ -2.36
CKS2P33552 SNORA12.2-201ENST00000391040 156 ntBASIC0.31□□□□□ -2.36
CKS2P33552 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.31□□□□□ -2.36
CKS2P33552 AL359704.1-201ENST00000411586 781 ntBASIC0.31□□□□□ -2.36
CKS2P33552 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms