Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 RNA5SP390-201ENST00000410191 113 ntBASIC0.46□□□□□ -2.34
SDC4P31431 RNU2-42P-201ENST00000410697 113 ntBASIC0.46□□□□□ -2.34
SDC4P31431 AL606517.1-201ENST00000446914 387 ntBASIC0.46□□□□□ -2.34
SDC4P31431 MTCO2P25-201ENST00000447065 681 ntBASIC0.46□□□□□ -2.34
SDC4P31431 SNORD124-201ENST00000459577 104 ntBASIC0.46□□□□□ -2.34
SDC4P31431 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.46□□□□□ -2.34
SDC4P31431 AC079140.3-201ENST00000511111 550 ntBASIC0.46□□□□□ -2.34
SDC4P31431 SUMO2P18-201ENST00000518873 252 ntBASIC0.46□□□□□ -2.34
SDC4P31431 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.46□□□□□ -2.34
SDC4P31431 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.46□□□□□ -2.34
SDC4P31431 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.46□□□□□ -2.34
SDC4P31431 AC098483.2-201ENST00000603158 454 ntBASIC0.46□□□□□ -2.34
SDC4P31431 AC107304.1-201ENST00000604229 296 ntBASIC0.46□□□□□ -2.34
SDC4P31431 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.46□□□□□ -2.34
SDC4P31431 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SDC4P31431 SNORA63D-201ENST00000364359 132 ntBASIC0.45□□□□□ -2.34
SDC4P31431 MIR200A-201ENST00000384875 90 ntBASIC0.45□□□□□ -2.34
SDC4P31431 RNU6-817P-201ENST00000391083 104 ntBASIC0.45□□□□□ -2.34
SDC4P31431 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.45□□□□□ -2.34
SDC4P31431 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.45□□□□□ -2.34
SDC4P31431 AC005094.1-201ENST00000440420 368 ntBASIC0.45□□□□□ -2.34
SDC4P31431 MTND5P14-201ENST00000441481 1267 ntBASIC0.45□□□□□ -2.34
SDC4P31431 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.45□□□□□ -2.34
SDC4P31431 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.45□□□□□ -2.34
SDC4P31431 MTND1P16-201ENST00000465177 898 ntBASIC0.45□□□□□ -2.34
SDC4P31431 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
SDC4P31431 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.45□□□□□ -2.34
SDC4P31431 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.45□□□□□ -2.34
SDC4P31431 MIR6513-201ENST00000621188 64 ntBASIC0.45□□□□□ -2.34
SDC4P31431 AP000676.3-201ENST00000623299 569 ntBASIC0.45□□□□□ -2.34
SDC4P31431 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.45□□□□□ -2.34
SDC4P31431 MTND4P21-201ENST00000453886 1357 ntBASIC0.45□□□□□ -2.34
SDC4P31431 AC023934.1-201ENST00000574529 2389 ntBASIC0.44□□□□□ -2.34
SDC4P31431 MIR16-2-201ENST00000362117 81 ntBASIC0.44□□□□□ -2.34
SDC4P31431 RNU6-1284P-201ENST00000363701 100 ntBASIC0.44□□□□□ -2.34
SDC4P31431 Y_RNA.408-201ENST00000383987 102 ntBASIC0.44□□□□□ -2.34
SDC4P31431 SNORD12-201ENST00000391002 90 ntBASIC0.44□□□□□ -2.34
SDC4P31431 DEFB130D-201ENST00000426866 237 ntBASIC0.44□□□□□ -2.34
SDC4P31431 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.44□□□□□ -2.34
SDC4P31431 AC067942.3-201ENST00000512025 362 ntBASIC0.44□□□□□ -2.34
SDC4P31431 MIR449C-201ENST00000516047 92 ntBASIC0.44□□□□□ -2.34
SDC4P31431 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.44□□□□□ -2.34
SDC4P31431 AC016957.1-201ENST00000534895 309 ntBASIC0.44□□□□□ -2.34
SDC4P31431 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.44□□□□□ -2.34
SDC4P31431 AL590229.1-201ENST00000603497 542 ntBASIC0.44□□□□□ -2.34
SDC4P31431 AL451064.1-201ENST00000607718 471 ntBASIC0.44□□□□□ -2.34
SDC4P31431 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.44□□□□□ -2.34
SDC4P31431 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SDC4P31431 MIR340-201ENST00000362125 95 ntBASIC0.43□□□□□ -2.34
SDC4P31431 RNU6-212P-201ENST00000362642 104 ntBASIC0.43□□□□□ -2.34
SDC4P31431 Y_RNA.116-201ENST00000363292 103 ntBASIC0.43□□□□□ -2.34
SDC4P31431 RNU6-650P-201ENST00000365658 111 ntBASIC0.43□□□□□ -2.34
SDC4P31431 RNY1P14-201ENST00000384426 108 ntBASIC0.43□□□□□ -2.34
SDC4P31431 RNU6-110P-201ENST00000384508 104 ntBASIC0.43□□□□□ -2.34
SDC4P31431 RNU6-1176P-201ENST00000390955 107 ntBASIC0.43□□□□□ -2.34
SDC4P31431 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
SDC4P31431 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.43□□□□□ -2.34
SDC4P31431 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.43□□□□□ -2.34
SDC4P31431 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.43□□□□□ -2.34
SDC4P31431 snoU13.30-201ENST00000458951 104 ntBASIC0.43□□□□□ -2.34
SDC4P31431 RNU7-59P-201ENST00000459101 61 ntBASIC0.43□□□□□ -2.34
SDC4P31431 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
SDC4P31431 AC010468.3-201ENST00000508225 458 ntBASIC0.43□□□□□ -2.34
SDC4P31431 RNA5SP121-201ENST00000516537 101 ntBASIC0.43□□□□□ -2.34
SDC4P31431 RNU6-165P-201ENST00000517170 99 ntBASIC0.43□□□□□ -2.34
SDC4P31431 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.43□□□□□ -2.34
SDC4P31431 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.43□□□□□ -2.34
SDC4P31431 ZNF92P2-201ENST00000600543 1059 ntBASIC0.43□□□□□ -2.34
SDC4P31431 AL391001.1-201ENST00000602747 715 ntBASIC0.43□□□□□ -2.34
SDC4P31431 AC009229.3-201ENST00000608056 282 ntBASIC0.43□□□□□ -2.34
SDC4P31431 MIR6734-201ENST00000621166 68 ntBASIC0.43□□□□□ -2.34
SDC4P31431 AC007792.1-201ENST00000623023 402 ntBASIC0.43□□□□□ -2.34
SDC4P31431 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.43□□□□□ -2.34
SDC4P31431 RNU6-1019P-201ENST00000364424 107 ntBASIC0.42□□□□□ -2.34
SDC4P31431 MIR10B-201ENST00000385011 110 ntBASIC0.42□□□□□ -2.34
SDC4P31431 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.42□□□□□ -2.34
SDC4P31431 AL079342.2-201ENST00000403367 482 ntBASIC0.42□□□□□ -2.34
SDC4P31431 RPS3AP1-201ENST00000413190 320 ntBASIC0.42□□□□□ -2.34
SDC4P31431 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.42□□□□□ -2.34
SDC4P31431 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.42□□□□□ -2.34
SDC4P31431 AC123900.1-201ENST00000420390 96 ntBASIC0.42□□□□□ -2.34
SDC4P31431 AL590556.1-201ENST00000423231 483 ntBASIC0.42□□□□□ -2.34
SDC4P31431 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.42□□□□□ -2.34
SDC4P31431 MTCO1P3-201ENST00000429327 192 ntBASIC0.42□□□□□ -2.34
SDC4P31431 TXNL1P1-201ENST00000429528 554 ntBASIC0.42□□□□□ -2.34
SDC4P31431 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.42□□□□□ -2.34
SDC4P31431 CETN4P-201ENST00000432407 469 ntBASIC0.42□□□□□ -2.34
SDC4P31431 AL591704.1-201ENST00000432574 275 ntBASIC0.42□□□□□ -2.34
SDC4P31431 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.42□□□□□ -2.34
SDC4P31431 AC099677.2-201ENST00000436385 175 ntBASIC0.42□□□□□ -2.34
SDC4P31431 SNRPEP7-201ENST00000438350 220 ntBASIC0.42□□□□□ -2.34
SDC4P31431 MTCO3P43-201ENST00000440974 771 ntBASIC0.42□□□□□ -2.34
SDC4P31431 MTND1P30-201ENST00000441241 901 ntBASIC0.42□□□□□ -2.34
SDC4P31431 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.42□□□□□ -2.34
SDC4P31431 RPL18AP17-201ENST00000455326 198 ntBASIC0.42□□□□□ -2.34
SDC4P31431 RNU4-54P-201ENST00000516428 129 ntBASIC0.42□□□□□ -2.34
SDC4P31431 RNU6-405P-201ENST00000516637 110 ntBASIC0.42□□□□□ -2.34
SDC4P31431 RNU6-467P-201ENST00000517027 110 ntBASIC0.42□□□□□ -2.34
SDC4P31431 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.42□□□□□ -2.34
SDC4P31431 SNORA4-201ENST00000584302 138 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms