Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RPL21P90-201ENST00000415692 466 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.83□□□□□ -2.12
HOXA9P31269 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXA9P31269 AL365338.1-201ENST00000422282 858 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 RPL30P4-201ENST00000429309 333 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AL353689.1-201ENST00000438895 199 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXA9P31269 RPS29P15-201ENST00000458329 171 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 RNU7-182P-201ENST00000459009 62 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 snoU109.2-201ENST00000459316 135 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AF213884.2-201ENST00000510417 903 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 RNU1-86P-201ENST00000516108 154 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 RNU1-107P-201ENST00000516617 154 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.83□□□□□ -2.12
HOXA9P31269 MIR4765-201ENST00000585007 77 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HOXA9P31269 AC073539.2-201ENST00000597113 165 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AC068790.2-201ENST00000602601 557 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AC073648.5-201ENST00000603502 305 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 MIR8081-201ENST00000611533 95 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
HOXA9P31269 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AC092656.1-203ENST00000624134 423 ntBASIC1.83□□□□□ -2.12
HOXA9P31269 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.83□□□□□ -2.12
HOXA9P31269 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.83□□□□□ -2.12
HOXA9P31269 ZNF680P1-201ENST00000436625 1469 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HOXA9P31269 RNU4-40P-201ENST00000364351 143 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 SNORD14B-201ENST00000364533 90 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 RNU6-1280P-201ENST00000365211 107 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 RNU6-1179P-201ENST00000384667 107 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 RNU6-19P-201ENST00000384718 107 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 RNU2-66P-201ENST00000410650 161 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 RNA5SP247-201ENST00000411181 105 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXA9P31269 MTATP6P18-201ENST00000417994 673 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 BTF3P4-201ENST00000418852 495 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 AL353193.1-201ENST00000421444 268 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 MTCO2P19-201ENST00000427513 598 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXA9P31269 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.82□□□□□ -2.12
HOXA9P31269 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.82□□□□□ -2.12
HOXA9P31269 RPL23AP6-201ENST00000446637 472 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 NDUFB1P2-201ENST00000449477 176 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.82□□□□□ -2.12
HOXA9P31269 BTF3P15-201ENST00000455606 336 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXA9P31269 AC006512.1-201ENST00000468816 291 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 MTND2P33-201ENST00000506452 1031 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 AC108078.1-201ENST00000508073 725 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 MTND3P25-201ENST00000509243 135 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 RNU6-405P-201ENST00000516637 110 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 AP005435.4-201ENST00000529514 284 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 AC087683.1-201ENST00000591187 441 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.82□□□□□ -2.12
HOXA9P31269 VN1R80P-201ENST00000597126 338 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 AC087045.1-201ENST00000605856 382 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 AC097065.2-201ENST00000608159 533 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.82□□□□□ -2.12
HOXA9P31269 SEPT14P19-203ENST00000633205 211 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 U6.114-201ENST00000636407 96 ntBASIC1.82□□□□□ -2.12
HOXA9P31269 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.82□□□□□ -2.12
HOXA9P31269 RNU6-1287P-201ENST00000362914 107 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 RNU6-942P-201ENST00000363002 107 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 RNU6-1060P-201ENST00000384664 107 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 RNU6-606P-201ENST00000384721 111 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 FGF7P8-201ENST00000402994 292 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 FTH1P15-201ENST00000406984 280 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 RNU2-3P-201ENST00000410144 191 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 RNU2-63P-201ENST00000410792 194 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 CYCSP33-201ENST00000414485 327 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 AL353621.1-201ENST00000418219 243 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 PTGES3P4-201ENST00000426243 356 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 AC010975.2-201ENST00000427781 588 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 AL669831.1-202ENST00000428504 417 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 AL627311.1-201ENST00000431514 115 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXA9P31269 AL645568.3-201ENST00000433683 316 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 AL596276.1-201ENST00000434465 418 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.81□□□□□ -2.12
HOXA9P31269 AL451074.3-201ENST00000437709 472 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 GTF2IP13-201ENST00000438487 386 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 MTND1P18-201ENST00000448191 573 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 RPS3AP17-201ENST00000472594 777 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 AC011005.2-201ENST00000487324 359 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HOXA9P31269 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
HOXA9P31269 MTCO3P7-201ENST00000510008 774 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXA9P31269 ACA59.2-201ENST00000517061 156 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.81□□□□□ -2.12
HOXA9P31269 CBX3P7-201ENST00000532876 502 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HOXA9P31269 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXA9P31269 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXA9P31269 ANP32BP3-201ENST00000559213 706 ntBASIC1.81□□□□□ -2.12
HOXA9P31269 MIR4299-201ENST00000577899 72 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms