Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.46□□□□□ -1.86
XPAP23025 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.46□□□□□ -1.86
XPAP23025 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.46□□□□□ -1.86
XPAP23025 AC110794.1-201ENST00000505816 425 ntBASIC3.46□□□□□ -1.86
XPAP23025 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.46□□□□□ -1.86
XPAP23025 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.46□□□□□ -1.86
XPAP23025 AC074250.1-201ENST00000511117 192 ntBASIC3.46□□□□□ -1.86
XPAP23025 RNU7-4P-201ENST00000516961 62 ntBASIC3.46□□□□□ -1.86
XPAP23025 SNORA31.21-201ENST00000517180 77 ntBASIC3.46□□□□□ -1.86
XPAP23025 AC093331.1-201ENST00000521474 169 ntBASIC3.46□□□□□ -1.86
XPAP23025 AL590705.4-201ENST00000532209 134 ntBASIC3.46□□□□□ -1.86
XPAP23025 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.46□□□□□ -1.86
XPAP23025 AC006199.1-201ENST00000548728 219 ntBASIC3.46□□□□□ -1.86
XPAP23025 CR383656.8-201ENST00000549046 145 ntBASIC3.46□□□□□ -1.86
XPAP23025 NACAP3-201ENST00000552100 481 ntBASIC3.46□□□□□ -1.86
XPAP23025 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.46□□□□□ -1.86
XPAP23025 MIR7975-201ENST00000619350 68 ntBASIC3.46□□□□□ -1.86
XPAP23025 AC010680.1-201ENST00000590024 3590 ntBASIC3.46□□□□□ -1.86
XPAP23025 AC092435.3-201ENST00000565538 3654 ntBASIC3.46□□□□□ -1.86
XPAP23025 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
XPAP23025 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.46□□□□□ -1.86
XPAP23025 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.46□□□□□ -1.86
XPAP23025 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
XPAP23025 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
XPAP23025 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.45□□□□□ -1.86
XPAP23025 SET-203ENST00000372688 801 ntTSL 2 BASIC3.45□□□□□ -1.86
XPAP23025 Y_RNA.405-201ENST00000383979 100 ntBASIC3.45□□□□□ -1.86
XPAP23025 Y_RNA.451-201ENST00000384200 100 ntBASIC3.45□□□□□ -1.86
XPAP23025 RNU6-708P-201ENST00000384217 107 ntBASIC3.45□□□□□ -1.86
XPAP23025 RNU6-505P-201ENST00000384427 107 ntBASIC3.45□□□□□ -1.86
XPAP23025 Y_RNA.524-201ENST00000384564 100 ntBASIC3.45□□□□□ -1.86
XPAP23025 Y_RNA.561-201ENST00000384694 100 ntBASIC3.45□□□□□ -1.86
XPAP23025 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.45□□□□□ -1.86
XPAP23025 AC007098.1-201ENST00000420122 367 ntBASIC3.45□□□□□ -1.86
XPAP23025 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.45□□□□□ -1.86
XPAP23025 AC007969.2-201ENST00000441891 191 ntBASIC3.45□□□□□ -1.86
XPAP23025 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.45□□□□□ -1.86
XPAP23025 RPS29P31-201ENST00000446147 164 ntBASIC3.45□□□□□ -1.86
XPAP23025 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
XPAP23025 AC006026.2-201ENST00000457376 180 ntBASIC3.45□□□□□ -1.86
XPAP23025 RPL30P10-201ENST00000488148 337 ntBASIC3.45□□□□□ -1.86
XPAP23025 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.45□□□□□ -1.86
XPAP23025 Y_RNA.721-201ENST00000517207 102 ntBASIC3.45□□□□□ -1.86
XPAP23025 SNORA31.23-201ENST00000517219 133 ntBASIC3.45□□□□□ -1.86
XPAP23025 AC022616.4-201ENST00000522985 181 ntBASIC3.45□□□□□ -1.86
XPAP23025 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.45□□□□□ -1.86
XPAP23025 AC040926.1-201ENST00000530195 238 ntBASIC3.45□□□□□ -1.86
XPAP23025 AC026333.2-201ENST00000542164 106 ntBASIC3.45□□□□□ -1.86
XPAP23025 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.45□□□□□ -1.86
XPAP23025 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.44□□□□□ -1.86
XPAP23025 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
XPAP23025 SNORD32A-201ENST00000364805 84 ntBASIC3.44□□□□□ -1.86
XPAP23025 U3.19-201ENST00000390893 196 ntBASIC3.44□□□□□ -1.86
XPAP23025 SNORA12.2-201ENST00000391040 156 ntBASIC3.44□□□□□ -1.86
XPAP23025 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.44□□□□□ -1.86
XPAP23025 RPS29P12-201ENST00000460178 152 ntBASIC3.44□□□□□ -1.86
XPAP23025 AP002884.2-201ENST00000471647 395 ntBASIC3.44□□□□□ -1.86
XPAP23025 RPL30P1-201ENST00000488676 339 ntBASIC3.44□□□□□ -1.86
XPAP23025 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.44□□□□□ -1.86
XPAP23025 MRPS35P2-201ENST00000508242 191 ntBASIC3.44□□□□□ -1.86
XPAP23025 SNORA40.14-201ENST00000516543 86 ntBASIC3.44□□□□□ -1.86
XPAP23025 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.44□□□□□ -1.86
XPAP23025 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.44□□□□□ -1.86
XPAP23025 AC010928.2-201ENST00000588017 287 ntBASIC3.44□□□□□ -1.86
XPAP23025 AC107294.3-201ENST00000609211 526 ntBASIC3.44□□□□□ -1.86
XPAP23025 AP003122.5-201ENST00000527668 3766 ntBASIC3.44□□□□□ -1.86
XPAP23025 AC099654.7-201ENST00000635788 2127 ntBASIC3.44□□□□□ -1.86
XPAP23025 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
XPAP23025 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
XPAP23025 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
XPAP23025 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
XPAP23025 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.43□□□□□ -1.86
XPAP23025 Y_RNA.149-201ENST00000363558 117 ntBASIC3.43□□□□□ -1.86
XPAP23025 Y_RNA.193-201ENST00000363979 102 ntBASIC3.43□□□□□ -1.86
XPAP23025 RNU1-33P-201ENST00000364249 162 ntBASIC3.43□□□□□ -1.86
XPAP23025 Y_RNA.574-201ENST00000384766 95 ntBASIC3.43□□□□□ -1.86
XPAP23025 MIR544A-201ENST00000384855 91 ntBASIC3.43□□□□□ -1.86
XPAP23025 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.43□□□□□ -1.86
XPAP23025 RPS3AP12-201ENST00000443616 753 ntBASIC3.43□□□□□ -1.86
XPAP23025 AC124916.1-201ENST00000444020 547 ntBASIC3.43□□□□□ -1.86
XPAP23025 SNRPGP7-201ENST00000469016 106 ntBASIC3.43□□□□□ -1.86
XPAP23025 MED28P2-201ENST00000475771 317 ntBASIC3.43□□□□□ -1.86
XPAP23025 AP001025.1-201ENST00000486139 332 ntBASIC3.43□□□□□ -1.86
XPAP23025 ACA59.2-201ENST00000517061 156 ntBASIC3.43□□□□□ -1.86
XPAP23025 IGKV2-26-201ENST00000518305 343 ntBASIC3.43□□□□□ -1.86
XPAP23025 AC144568.1-201ENST00000520139 137 ntBASIC3.43□□□□□ -1.86
XPAP23025 AC131281.1-201ENST00000522984 164 ntBASIC3.43□□□□□ -1.86
XPAP23025 AC009163.5-201ENST00000575421 637 ntBASIC3.43□□□□□ -1.86
XPAP23025 MIR3671-201ENST00000580455 88 ntBASIC3.43□□□□□ -1.86
XPAP23025 MIR3149-201ENST00000584629 83 ntBASIC3.43□□□□□ -1.86
XPAP23025 MIR4276-201ENST00000584832 70 ntBASIC3.43□□□□□ -1.86
XPAP23025 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.43□□□□□ -1.86
XPAP23025 VN1R91P-201ENST00000594377 169 ntBASIC3.43□□□□□ -1.86
XPAP23025 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.43□□□□□ -1.86
XPAP23025 U2.1-201ENST00000618978 145 ntBASIC3.43□□□□□ -1.86
XPAP23025 AC024581.2-201ENST00000619986 252 ntBASIC3.43□□□□□ -1.86
XPAP23025 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.43□□□□□ -1.86
XPAP23025 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.43□□□□□ -1.86
XPAP23025 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
XPAP23025 GABRG2-229ENST00000641017 3628 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms