Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
RPS4Y1P22090 MIR3937-201ENST00000580135 106 ntBASIC0.84□□□□□ -2.27
RPS4Y1P22090 AC120349.3-201ENST00000624377 529 ntBASIC0.84□□□□□ -2.27
RPS4Y1P22090 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
RPS4Y1P22090 Y_RNA.46-201ENST00000362695 102 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 Y_RNA.164-201ENST00000363709 102 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 RNU6-384P-201ENST00000364900 104 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 RNU6-1080P-201ENST00000383982 107 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 RNU6-26P-201ENST00000383985 107 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.83□□□□□ -2.28
RPS4Y1P22090 CST2P1-201ENST00000425770 87 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 DYNLT3P2-201ENST00000442517 295 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 Z73417.1-201ENST00000447373 778 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.83□□□□□ -2.28
RPS4Y1P22090 SNORA3.4-201ENST00000515969 96 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 RNU6-276P-201ENST00000516114 96 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 AC092451.2-201ENST00000538746 658 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.83□□□□□ -2.28
RPS4Y1P22090 MIR5094-201ENST00000578766 85 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 AC091135.1-201ENST00000585943 307 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 MTND3P19-201ENST00000603825 345 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 AL136363.2-201ENST00000604173 851 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 AP000654.2-201ENST00000605633 586 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 AC144521.1-201ENST00000607148 956 ntBASIC0.83□□□□□ -2.28
RPS4Y1P22090 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
RPS4Y1P22090 AC099786.3-201ENST00000565735 1410 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 MIR340-201ENST00000362125 95 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 SNORD56.1-201ENST00000362913 68 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 AL357139.1-201ENST00000407792 426 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 AL589872.1-201ENST00000426602 288 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 RPL23AP30-201ENST00000432419 501 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.82□□□□□ -2.28
RPS4Y1P22090 KATNBL1P3-201ENST00000443475 909 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.82□□□□□ -2.28
RPS4Y1P22090 RPL39P29-201ENST00000447779 157 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.82□□□□□ -2.28
RPS4Y1P22090 OR2AQ1P-201ENST00000451972 200 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.82□□□□□ -2.28
RPS4Y1P22090 AP003168.1-201ENST00000530091 307 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.82□□□□□ -2.28
RPS4Y1P22090 RAB11AP2-201ENST00000545905 639 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.82□□□□□ -2.28
RPS4Y1P22090 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 MTND4LP25-201ENST00000570218 163 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 AC004492.1-201ENST00000607036 742 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 AC095038.3-201ENST00000634439 195 ntBASIC0.82□□□□□ -2.28
RPS4Y1P22090 SNORD33-201ENST00000362761 85 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 SNORA4.1-201ENST00000364263 144 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 SNORD32B-201ENST00000364460 84 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 RNU6-1187P-201ENST00000364771 110 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 SNORA70.7-201ENST00000384159 133 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 RPS3AP36-201ENST00000398190 775 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.81□□□□□ -2.28
RPS4Y1P22090 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.81□□□□□ -2.28
RPS4Y1P22090 AL161935.2-201ENST00000414627 60 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 AL031779.1-201ENST00000415663 330 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 RPL21P111-201ENST00000418453 477 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.81□□□□□ -2.28
RPS4Y1P22090 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RPS4Y1P22090 ISCA1P6-201ENST00000427740 390 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 MTND1P30-201ENST00000441241 901 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 AC007969.2-201ENST00000441891 191 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
RPS4Y1P22090 AL122001.1-201ENST00000457027 370 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.81□□□□□ -2.28
RPS4Y1P22090 MTCO3P9-201ENST00000506989 781 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 AC097473.1-201ENST00000508142 408 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 AF131216.2-201ENST00000512316 564 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.81□□□□□ -2.28
RPS4Y1P22090 RNA5SP490-201ENST00000517141 136 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.81□□□□□ -2.28
RPS4Y1P22090 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.81□□□□□ -2.28
RPS4Y1P22090 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.81□□□□□ -2.28
RPS4Y1P22090 AC123904.2-201ENST00000548059 300 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.81□□□□□ -2.28
RPS4Y1P22090 AL353778.1-201ENST00000603149 408 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 HSPE1P19-201ENST00000603327 295 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 OR4G3P-201ENST00000633500 913 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 AL133216.2-202ENST00000634512 349 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 AC100821.1-201ENST00000523153 2479 ntBASIC0.81□□□□□ -2.28
RPS4Y1P22090 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.8□□□□□ -2.28
RPS4Y1P22090 RNU6-360P-201ENST00000390944 104 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 MTATP6P20-201ENST00000414147 562 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.8□□□□□ -2.28
RPS4Y1P22090 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.8□□□□□ -2.28
RPS4Y1P22090 HSPE1P9-201ENST00000440046 311 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.8□□□□□ -2.28
RPS4Y1P22090 AC006026.2-201ENST00000457376 180 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 RPS23P4-201ENST00000487908 423 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 MTND2P33-201ENST00000506452 1031 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 RNU2-10P-201ENST00000516375 211 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 RNA5SP102-201ENST00000516865 106 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 RNA5SP404-201ENST00000517118 132 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.8□□□□□ -2.28
RPS4Y1P22090 AP003465.2-201ENST00000602571 373 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 AL391001.1-201ENST00000602747 715 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 RMST_7.1-201ENST00000621935 268 ntBASIC0.8□□□□□ -2.28
RPS4Y1P22090 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms