Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC021231.3-201ENST00000558497 370 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 AL133393.1-201ENST00000603277 287 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 AC016727.2-201ENST00000603988 621 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.28□□□□□ -1.72
ERCC3P19447 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERCC3P19447 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
ERCC3P19447 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERCC3P19447 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ERCC3P19447 Y_RNA.557-201ENST00000384680 107 ntBASIC4.27□□□□□ -1.73
ERCC3P19447 MIR490-201ENST00000384865 128 ntBASIC4.27□□□□□ -1.73
ERCC3P19447 RNU6-823P-201ENST00000391042 103 ntBASIC4.27□□□□□ -1.73
ERCC3P19447 MTCO3P19-201ENST00000415864 321 ntBASIC4.27□□□□□ -1.73
ERCC3P19447 AC090525.1-201ENST00000479116 478 ntBASIC4.27□□□□□ -1.73
ERCC3P19447 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.27□□□□□ -1.73
ERCC3P19447 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.27□□□□□ -1.73
ERCC3P19447 RNA5SP208-201ENST00000516156 78 ntBASIC4.27□□□□□ -1.73
ERCC3P19447 SNORA40.14-201ENST00000516543 86 ntBASIC4.27□□□□□ -1.73
ERCC3P19447 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ERCC3P19447 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.27□□□□□ -1.73
ERCC3P19447 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.27□□□□□ -1.73
ERCC3P19447 RNU6-91P-201ENST00000607774 107 ntBASIC4.27□□□□□ -1.73
ERCC3P19447 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
ERCC3P19447 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ERCC3P19447 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.27□□□□□ -1.73
ERCC3P19447 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.26□□□□□ -1.73
ERCC3P19447 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
ERCC3P19447 MIR153-2-201ENST00000385225 87 ntBASIC4.26□□□□□ -1.73
ERCC3P19447 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ERCC3P19447 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.26□□□□□ -1.73
ERCC3P19447 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.26□□□□□ -1.73
ERCC3P19447 ATP5HP2-201ENST00000433885 485 ntBASIC4.26□□□□□ -1.73
ERCC3P19447 AC112492.4-201ENST00000456549 352 ntBASIC4.26□□□□□ -1.73
ERCC3P19447 SNORD105B-201ENST00000458770 79 ntBASIC4.26□□□□□ -1.73
ERCC3P19447 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC3P19447 BTF3L4P4-201ENST00000506381 449 ntBASIC4.26□□□□□ -1.73
ERCC3P19447 SNORA31.16-201ENST00000516773 139 ntBASIC4.26□□□□□ -1.73
ERCC3P19447 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ERCC3P19447 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC3P19447 AC113195.1-201ENST00000579952 141 ntBASIC4.26□□□□□ -1.73
ERCC3P19447 AC008121.3-201ENST00000618726 433 ntBASIC4.26□□□□□ -1.73
ERCC3P19447 AC138305.3-201ENST00000624988 240 ntBASIC4.26□□□□□ -1.73
ERCC3P19447 SNORD98-201ENST00000636377 67 ntBASIC4.26□□□□□ -1.73
ERCC3P19447 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ERCC3P19447 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.26□□□□□ -1.73
ERCC3P19447 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ERCC3P19447 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ERCC3P19447 RNU6-222P-201ENST00000362438 107 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 RNU6-238P-201ENST00000363313 106 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 RNU6-529P-201ENST00000363383 104 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 CYCSP4-201ENST00000429682 331 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.25□□□□□ -1.73
ERCC3P19447 RN7SL93P-201ENST00000463035 293 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 AIG1P1-201ENST00000503376 148 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 ANXA2P1-201ENST00000505539 926 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 AC022868.1-201ENST00000517767 391 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 AC022616.4-201ENST00000522985 181 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.25□□□□□ -1.73
ERCC3P19447 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.25□□□□□ -1.73
ERCC3P19447 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.25□□□□□ -1.73
ERCC3P19447 MIR5195-201ENST00000583555 115 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 AC073410.2-201ENST00000603240 332 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 RMST_6.1-201ENST00000611980 203 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 AC137590.2-201ENST00000619709 240 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 AC002064.3-201ENST00000623448 346 ntBASIC4.25□□□□□ -1.73
ERCC3P19447 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ERCC3P19447 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
ERCC3P19447 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ERCC3P19447 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.24□□□□□ -1.73
ERCC3P19447 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ERCC3P19447 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ERCC3P19447 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ERCC3P19447 SNORD9-201ENST00000362566 104 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 Y_RNA.526-201ENST00000384572 110 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 RNU6-1105P-201ENST00000384774 107 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ERCC3P19447 USP9YP16-201ENST00000430287 407 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 AL445305.1-201ENST00000432577 575 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.24□□□□□ -1.73
ERCC3P19447 USP9YP23-201ENST00000455085 407 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.24□□□□□ -1.73
ERCC3P19447 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.24□□□□□ -1.73
ERCC3P19447 RNU6-635P-201ENST00000516651 102 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 AC090877.1-201ENST00000561418 344 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 MIR4765-201ENST00000585007 77 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 AC012493.2-201ENST00000595083 291 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.24□□□□□ -1.73
ERCC3P19447 uc_338.14-201ENST00000613162 166 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 AC091903.1-201ENST00000624322 454 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ERCC3P19447 IPO8P1-201ENST00000455509 3109 ntBASIC4.24□□□□□ -1.73
ERCC3P19447 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.23□□□□□ -1.73
ERCC3P19447 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.23□□□□□ -1.73
ERCC3P19447 ZNF826P-207ENST00000622273 1910 ntBASIC4.23□□□□□ -1.73
ERCC3P19447 RNU6-1285P-201ENST00000363480 105 ntBASIC4.23□□□□□ -1.73
ERCC3P19447 Y_RNA.152-201ENST00000363578 100 ntBASIC4.23□□□□□ -1.73
ERCC3P19447 RNA5SP267-201ENST00000364893 126 ntBASIC4.23□□□□□ -1.73
ERCC3P19447 RNA5SP424-201ENST00000390988 115 ntBASIC4.23□□□□□ -1.73
ERCC3P19447 AL358075.3-201ENST00000426289 226 ntBASIC4.23□□□□□ -1.73
ERCC3P19447 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.23□□□□□ -1.73
ERCC3P19447 AC006483.1-201ENST00000487308 313 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms