Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TOP1P11387 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.03□□□□□ -2.08
TOP1P11387 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TOP1P11387 RNA5SP432-201ENST00000362480 116 ntBASIC2.03□□□□□ -2.08
TOP1P11387 RNU6-1097P-201ENST00000363586 107 ntBASIC2.03□□□□□ -2.08
TOP1P11387 RNU6-288P-201ENST00000363690 104 ntBASIC2.03□□□□□ -2.08
TOP1P11387 Y_RNA.534-201ENST00000384599 112 ntBASIC2.03□□□□□ -2.08
TOP1P11387 MIR518A2-201ENST00000384966 87 ntBASIC2.03□□□□□ -2.08
TOP1P11387 AC068050.1-201ENST00000394891 380 ntBASIC2.03□□□□□ -2.08
TOP1P11387 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.03□□□□□ -2.08
TOP1P11387 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TOP1P11387 RPS12P24-201ENST00000412619 387 ntBASIC2.03□□□□□ -2.08
TOP1P11387 UBE2V1P10-201ENST00000414685 269 ntBASIC2.03□□□□□ -2.08
TOP1P11387 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TOP1P11387 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.03□□□□□ -2.08
TOP1P11387 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.03□□□□□ -2.08
TOP1P11387 HMGB1P29-201ENST00000505659 499 ntBASIC2.03□□□□□ -2.08
TOP1P11387 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.03□□□□□ -2.08
TOP1P11387 RNU6-237P-201ENST00000515985 71 ntBASIC2.03□□□□□ -2.08
TOP1P11387 SNORA25.15-201ENST00000516487 89 ntBASIC2.03□□□□□ -2.08
TOP1P11387 RNU2-44P-201ENST00000516795 194 ntBASIC2.03□□□□□ -2.08
TOP1P11387 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.03□□□□□ -2.08
TOP1P11387 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.03□□□□□ -2.08
TOP1P11387 AC024614.2-201ENST00000577584 372 ntBASIC2.03□□□□□ -2.08
TOP1P11387 MIR4775-201ENST00000581168 75 ntBASIC2.03□□□□□ -2.08
TOP1P11387 Z84480.1-201ENST00000605131 311 ntBASIC2.03□□□□□ -2.08
TOP1P11387 AC096772.1-201ENST00000609146 564 ntBASIC2.03□□□□□ -2.08
TOP1P11387 AC130324.3-201ENST00000614165 542 ntBASIC2.03□□□□□ -2.08
TOP1P11387 AC068792.1-201ENST00000621354 417 ntBASIC2.03□□□□□ -2.08
TOP1P11387 FRG1KP-201ENST00000623592 341 ntBASIC2.03□□□□□ -2.08
TOP1P11387 AC098679.4-201ENST00000624241 654 ntBASIC2.03□□□□□ -2.08
TOP1P11387 AC009161.2-201ENST00000624626 138 ntBASIC2.03□□□□□ -2.08
TOP1P11387 AC124864.2-201ENST00000624736 186 ntBASIC2.03□□□□□ -2.08
TOP1P11387 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TOP1P11387 OR5AK4P-201ENST00000635912 903 ntBASIC2.03□□□□□ -2.08
TOP1P11387 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
TOP1P11387 SNORA4.3-201ENST00000365564 137 ntBASIC2.02□□□□□ -2.09
TOP1P11387 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TOP1P11387 RNU6-1042P-201ENST00000384204 107 ntBASIC2.02□□□□□ -2.09
TOP1P11387 RNU6-456P-201ENST00000384493 107 ntBASIC2.02□□□□□ -2.09
TOP1P11387 CALM2P3-201ENST00000400429 449 ntBASIC2.02□□□□□ -2.09
TOP1P11387 MTCO1P21-201ENST00000416634 589 ntBASIC2.02□□□□□ -2.09
TOP1P11387 C8orf59P1-201ENST00000429930 303 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.02□□□□□ -2.09
TOP1P11387 AC079781.2-201ENST00000446424 169 ntBASIC2.02□□□□□ -2.09
TOP1P11387 BTF3P15-201ENST00000455606 336 ntBASIC2.02□□□□□ -2.09
TOP1P11387 RPL7P43-201ENST00000478876 753 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AC018868.1-201ENST00000491307 315 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AC107401.1-201ENST00000503426 685 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AC116562.3-201ENST00000506136 177 ntBASIC2.02□□□□□ -2.09
TOP1P11387 RBBP4P6-201ENST00000508098 202 ntBASIC2.02□□□□□ -2.09
TOP1P11387 Y_RNA.689-201ENST00000516589 107 ntBASIC2.02□□□□□ -2.09
TOP1P11387 RNU6-572P-201ENST00000516724 80 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AC009902.1-201ENST00000519351 183 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.02□□□□□ -2.09
TOP1P11387 AC068587.5-201ENST00000528506 175 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AC084851.1-201ENST00000529105 249 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.02□□□□□ -2.09
TOP1P11387 AC245505.1-201ENST00000556398 224 ntBASIC2.02□□□□□ -2.09
TOP1P11387 SUB1P2-201ENST00000556401 297 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.02□□□□□ -2.09
TOP1P11387 AC008521.1-201ENST00000587471 187 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AC068790.2-201ENST00000602601 557 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AC174048.1-201ENST00000603389 144 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AF250324.2-201ENST00000608299 610 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AC017083.3-201ENST00000609955 700 ntBASIC2.02□□□□□ -2.09
TOP1P11387 AL353997.5-201ENST00000618886 171 ntBASIC2.02□□□□□ -2.09
TOP1P11387 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.01□□□□□ -2.09
TOP1P11387 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TOP1P11387 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TOP1P11387 RNU1-17P-201ENST00000363022 152 ntBASIC2.01□□□□□ -2.09
TOP1P11387 RNA5SP99-201ENST00000364020 114 ntBASIC2.01□□□□□ -2.09
TOP1P11387 Y_RNA.296-201ENST00000364930 108 ntBASIC2.01□□□□□ -2.09
TOP1P11387 SNORD115-7-201ENST00000365306 82 ntBASIC2.01□□□□□ -2.09
TOP1P11387 RNU6-898P-201ENST00000365627 104 ntBASIC2.01□□□□□ -2.09
TOP1P11387 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TOP1P11387 Y_RNA.516-201ENST00000384541 124 ntBASIC2.01□□□□□ -2.09
TOP1P11387 MIR518D-201ENST00000385014 87 ntBASIC2.01□□□□□ -2.09
TOP1P11387 MIR301A-201ENST00000385261 86 ntBASIC2.01□□□□□ -2.09
TOP1P11387 RNU6-482P-201ENST00000391068 107 ntBASIC2.01□□□□□ -2.09
TOP1P11387 MTATP6P18-201ENST00000417994 673 ntBASIC2.01□□□□□ -2.09
TOP1P11387 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.01□□□□□ -2.09
TOP1P11387 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.01□□□□□ -2.09
TOP1P11387 AL592045.1-201ENST00000429867 352 ntBASIC2.01□□□□□ -2.09
TOP1P11387 MTND4P25-201ENST00000441039 533 ntBASIC2.01□□□□□ -2.09
TOP1P11387 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.01□□□□□ -2.09
TOP1P11387 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.01□□□□□ -2.09
TOP1P11387 PPP1R2P5-201ENST00000457256 603 ntBASIC2.01□□□□□ -2.09
TOP1P11387 RNU6-953P-201ENST00000459154 107 ntBASIC2.01□□□□□ -2.09
TOP1P11387 AC117522.1-201ENST00000509821 380 ntBASIC2.01□□□□□ -2.09
TOP1P11387 AC108078.2-201ENST00000510750 236 ntBASIC2.01□□□□□ -2.09
TOP1P11387 RNU6-410P-201ENST00000517006 107 ntBASIC2.01□□□□□ -2.09
TOP1P11387 SNRPGP17-201ENST00000603780 214 ntBASIC2.01□□□□□ -2.09
TOP1P11387 AC004492.1-201ENST00000607036 742 ntBASIC2.01□□□□□ -2.09
TOP1P11387 AC022893.3-201ENST00000607665 437 ntBASIC2.01□□□□□ -2.09
TOP1P11387 AC092954.2-201ENST00000609103 430 ntBASIC2.01□□□□□ -2.09
TOP1P11387 AC007684.1-201ENST00000609671 477 ntBASIC2.01□□□□□ -2.09
TOP1P11387 AC084782.3-201ENST00000612282 578 ntBASIC2.01□□□□□ -2.09
TOP1P11387 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.01□□□□□ -2.09
TOP1P11387 AC011155.2-201ENST00000623202 216 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms