Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 FGF7P8-201ENST00000402994 292 ntBASIC1.36□□□□□ -2.19
CD28P10747 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.36□□□□□ -2.19
CD28P10747 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.36□□□□□ -2.19
CD28P10747 HMGN2P19-201ENST00000425149 265 ntBASIC1.36□□□□□ -2.19
CD28P10747 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.36□□□□□ -2.19
CD28P10747 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.36□□□□□ -2.19
CD28P10747 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.36□□□□□ -2.19
CD28P10747 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.36□□□□□ -2.19
CD28P10747 HMGB3P17-201ENST00000504195 649 ntBASIC1.36□□□□□ -2.19
CD28P10747 Y_RNA.717-201ENST00000517106 92 ntBASIC1.36□□□□□ -2.19
CD28P10747 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CD28P10747 AP003392.2-201ENST00000527269 208 ntBASIC1.36□□□□□ -2.19
CD28P10747 AP005639.2-201ENST00000527592 928 ntBASIC1.36□□□□□ -2.19
CD28P10747 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.36□□□□□ -2.19
CD28P10747 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.36□□□□□ -2.19
CD28P10747 AC007375.1-201ENST00000554513 578 ntBASIC1.36□□□□□ -2.19
CD28P10747 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.36□□□□□ -2.19
CD28P10747 AC012414.6-201ENST00000568241 401 ntBASIC1.36□□□□□ -2.19
CD28P10747 AC064872.1-201ENST00000604823 1072 ntBASIC1.36□□□□□ -2.19
CD28P10747 AP001596.2-201ENST00000608410 312 ntBASIC1.36□□□□□ -2.19
CD28P10747 Z82243.1-201ENST00000609432 473 ntBASIC1.36□□□□□ -2.19
CD28P10747 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.36□□□□□ -2.19
CD28P10747 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CD28P10747 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.35□□□□□ -2.19
CD28P10747 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CD28P10747 MIR378A-201ENST00000362177 66 ntBASIC1.35□□□□□ -2.19
CD28P10747 SNORD56.1-201ENST00000362913 68 ntBASIC1.35□□□□□ -2.19
CD28P10747 RNU6-944P-201ENST00000364023 107 ntBASIC1.35□□□□□ -2.19
CD28P10747 RNU6-546P-201ENST00000383991 107 ntBASIC1.35□□□□□ -2.19
CD28P10747 MT-TH-201ENST00000387441 69 ntBASIC1.35□□□□□ -2.19
CD28P10747 MIR1262-201ENST00000408276 93 ntBASIC1.35□□□□□ -2.19
CD28P10747 RNU2-32P-201ENST00000411193 191 ntBASIC1.35□□□□□ -2.19
CD28P10747 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CD28P10747 MTND2P18-201ENST00000419962 1030 ntBASIC1.35□□□□□ -2.19
CD28P10747 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CD28P10747 AL596276.1-201ENST00000434465 418 ntBASIC1.35□□□□□ -2.19
CD28P10747 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.35□□□□□ -2.19
CD28P10747 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.35□□□□□ -2.19
CD28P10747 AC074344.1-201ENST00000512823 224 ntBASIC1.35□□□□□ -2.19
CD28P10747 MTCO3P28-201ENST00000513351 515 ntBASIC1.35□□□□□ -2.19
CD28P10747 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.35□□□□□ -2.19
CD28P10747 AC060788.1-201ENST00000521318 469 ntBASIC1.35□□□□□ -2.19
CD28P10747 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.35□□□□□ -2.19
CD28P10747 LRRC34P1-201ENST00000542742 915 ntBASIC1.35□□□□□ -2.19
CD28P10747 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.35□□□□□ -2.19
CD28P10747 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.35□□□□□ -2.19
CD28P10747 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.35□□□□□ -2.19
CD28P10747 AC109446.2-201ENST00000567872 497 ntBASIC1.35□□□□□ -2.19
CD28P10747 MIR3122-201ENST00000577243 73 ntBASIC1.35□□□□□ -2.19
CD28P10747 MIR4419B-201ENST00000577260 68 ntBASIC1.35□□□□□ -2.19
CD28P10747 AC024614.2-201ENST00000577584 372 ntBASIC1.35□□□□□ -2.19
CD28P10747 MIR4299-201ENST00000577899 72 ntBASIC1.35□□□□□ -2.19
CD28P10747 AC245014.2-201ENST00000603689 287 ntBASIC1.35□□□□□ -2.19
CD28P10747 AC005034.5-201ENST00000604219 466 ntBASIC1.35□□□□□ -2.19
CD28P10747 AC246785.4-201ENST00000605374 287 ntBASIC1.35□□□□□ -2.19
CD28P10747 AC006566.1-201ENST00000608943 513 ntBASIC1.35□□□□□ -2.19
CD28P10747 uc_338.11-201ENST00000619132 160 ntBASIC1.35□□□□□ -2.19
CD28P10747 AC007494.3-201ENST00000624660 743 ntBASIC1.35□□□□□ -2.19
CD28P10747 ZNF702P-202ENST00000434269 1966 ntBASIC1.35□□□□□ -2.19
CD28P10747 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CD28P10747 WWP1P1-201ENST00000466609 2769 ntBASIC1.35□□□□□ -2.19
CD28P10747 MTND4P23-201ENST00000447723 1363 ntBASIC1.34□□□□□ -2.19
CD28P10747 RNU6-661P-201ENST00000362409 107 ntBASIC1.34□□□□□ -2.19
CD28P10747 RNU6-1285P-201ENST00000363480 105 ntBASIC1.34□□□□□ -2.19
CD28P10747 RNU6-105P-201ENST00000363909 104 ntBASIC1.34□□□□□ -2.19
CD28P10747 SNORA62.1-201ENST00000364287 154 ntBASIC1.34□□□□□ -2.19
CD28P10747 RNU5E-7P-201ENST00000365290 117 ntBASIC1.34□□□□□ -2.19
CD28P10747 SNORA8-201ENST00000384574 139 ntBASIC1.34□□□□□ -2.19
CD28P10747 RNU6-1222P-201ENST00000384615 107 ntBASIC1.34□□□□□ -2.19
CD28P10747 RNA5SP465-201ENST00000391195 109 ntBASIC1.34□□□□□ -2.19
CD28P10747 SNORA26.8-201ENST00000391306 124 ntBASIC1.34□□□□□ -2.19
CD28P10747 RNU4-46P-201ENST00000410818 138 ntBASIC1.34□□□□□ -2.19
CD28P10747 RNU6-195P-201ENST00000411352 109 ntBASIC1.34□□□□□ -2.19
CD28P10747 SRIP3-201ENST00000413200 219 ntBASIC1.34□□□□□ -2.19
CD28P10747 BTF3P4-201ENST00000418852 495 ntBASIC1.34□□□□□ -2.19
CD28P10747 ISCA1P6-201ENST00000427740 390 ntBASIC1.34□□□□□ -2.19
CD28P10747 RPS15AP10-201ENST00000432472 382 ntBASIC1.34□□□□□ -2.19
CD28P10747 IFNA20P-201ENST00000436840 528 ntBASIC1.34□□□□□ -2.19
CD28P10747 DNAJC19P4-201ENST00000440115 345 ntBASIC1.34□□□□□ -2.19
CD28P10747 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.34□□□□□ -2.19
CD28P10747 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.34□□□□□ -2.19
CD28P10747 MTND1P18-201ENST00000448191 573 ntBASIC1.34□□□□□ -2.19
CD28P10747 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.34□□□□□ -2.19
CD28P10747 AC013470.1-201ENST00000453438 462 ntBASIC1.34□□□□□ -2.19
CD28P10747 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.34□□□□□ -2.19
CD28P10747 PRELID3BP1-201ENST00000457142 540 ntBASIC1.34□□□□□ -2.19
CD28P10747 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.34□□□□□ -2.19
CD28P10747 RNU7-182P-201ENST00000459009 62 ntBASIC1.34□□□□□ -2.19
CD28P10747 MTCO2P6-201ENST00000463134 685 ntBASIC1.34□□□□□ -2.19
CD28P10747 GMFBP1-201ENST00000467831 427 ntBASIC1.34□□□□□ -2.19
CD28P10747 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.34□□□□□ -2.19
CD28P10747 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CD28P10747 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.34□□□□□ -2.19
CD28P10747 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.34□□□□□ -2.19
CD28P10747 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.34□□□□□ -2.19
CD28P10747 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.34□□□□□ -2.19
CD28P10747 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.34□□□□□ -2.19
CD28P10747 OR5AL2P-201ENST00000532185 920 ntBASIC1.34□□□□□ -2.19
CD28P10747 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.34□□□□□ -2.19
CD28P10747 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms