Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL353997.5-201ENST00000618886 171 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.54□□□□□ -2.32
CXCL1P09341 AC068880.4-201ENST00000623082 495 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.54□□□□□ -2.32
CXCL1P09341 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.54□□□□□ -2.32
CXCL1P09341 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.53□□□□□ -2.32
CXCL1P09341 RNU6-1080P-201ENST00000383982 107 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 SNORA40.2-201ENST00000390847 128 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.53□□□□□ -2.32
CXCL1P09341 CYCSP33-201ENST00000414485 327 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 MTCO1P21-201ENST00000416634 589 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.53□□□□□ -2.32
CXCL1P09341 AC004941.2-201ENST00000427009 228 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 USP9YP11-201ENST00000427537 717 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 GTF2IP13-201ENST00000438487 386 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.53□□□□□ -2.32
CXCL1P09341 AC069257.2-201ENST00000441819 155 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 SNRPFP4-201ENST00000456366 242 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 AC093899.1-201ENST00000457984 376 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 snoU13.27-201ENST00000459278 104 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 COX6CP14-201ENST00000469580 174 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.53□□□□□ -2.32
CXCL1P09341 RNA5SP216-201ENST00000516111 123 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 RN7SKP219-201ENST00000516825 296 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.53□□□□□ -2.32
CXCL1P09341 AC098848.2-201ENST00000588023 330 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.53□□□□□ -2.32
CXCL1P09341 AC080078.3-201ENST00000605407 463 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 AC099785.1-201ENST00000605697 437 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 AC006270.3-201ENST00000605967 1036 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 FRG1KP-201ENST00000623592 341 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 AC091895.1-201ENST00000624494 256 ntBASIC0.53□□□□□ -2.32
CXCL1P09341 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
CXCL1P09341 SNORD114-24-201ENST00000365029 72 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 MIR608-201ENST00000384820 100 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 RAP1BP3-201ENST00000407180 549 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.52□□□□□ -2.33
CXCL1P09341 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.52□□□□□ -2.33
CXCL1P09341 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.52□□□□□ -2.33
CXCL1P09341 AC119751.4-201ENST00000507498 357 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 AC113347.3-201ENST00000509113 148 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 RNU6-197P-201ENST00000516680 100 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 SNORA70.22-201ENST00000517160 124 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.52□□□□□ -2.33
CXCL1P09341 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.52□□□□□ -2.33
CXCL1P09341 AP000907.2-201ENST00000530827 353 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 AP003484.1-201ENST00000530974 250 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 MIR3146-201ENST00000580367 79 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.52□□□□□ -2.33
CXCL1P09341 BNIP3P26-201ENST00000600827 554 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 VN1R82P-201ENST00000601481 356 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 AC105129.3-201ENST00000605455 485 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 AC124016.2-201ENST00000610058 665 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 AC040896.1-201ENST00000613819 479 ntBASIC0.52□□□□□ -2.33
CXCL1P09341 MIR10A-201ENST00000385043 110 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 SNORD12-201ENST00000391002 90 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 AC114482.1-201ENST00000418010 247 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 AC010099.3-201ENST00000423896 409 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 MTCO3P29-201ENST00000432119 779 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 HSPE1P13-201ENST00000451143 297 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 snoU13.30-201ENST00000458951 104 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.51□□□□□ -2.33
CXCL1P09341 ARL2BPP4-201ENST00000506854 471 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 Y_RNA.687-201ENST00000516558 91 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.51□□□□□ -2.33
CXCL1P09341 AC115990.1-201ENST00000526957 301 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.51□□□□□ -2.33
CXCL1P09341 BNIP3P6-201ENST00000549284 499 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.51□□□□□ -2.33
CXCL1P09341 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.51□□□□□ -2.33
CXCL1P09341 VN1R107P-201ENST00000601784 209 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.51□□□□□ -2.33
CXCL1P09341 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 AL138955.1-201ENST00000622881 1040 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 AC024940.5-201ENST00000622889 474 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 AC068647.2-201ENST00000637380 353 ntBASIC0.51□□□□□ -2.33
CXCL1P09341 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.5□□□□□ -2.33
CXCL1P09341 RNU6-462P-201ENST00000362659 105 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 SNORD56.1-201ENST00000362913 68 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 Y_RNA.311-201ENST00000365068 96 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 RNU6-53P-201ENST00000365367 106 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 RNU6-190P-201ENST00000384154 102 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 MIR222-201ENST00000384992 110 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.5□□□□□ -2.33
CXCL1P09341 MTND4P3-201ENST00000417829 541 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 ARL5AP1-201ENST00000418991 388 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 AC007969.2-201ENST00000441891 191 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 ATP5J2P3-201ENST00000451550 258 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 AL122001.1-201ENST00000457027 370 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 AC117454.1-201ENST00000491120 168 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.5□□□□□ -2.33
CXCL1P09341 RNU5F-2P-201ENST00000516066 82 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.5□□□□□ -2.33
CXCL1P09341 AC015712.3-201ENST00000559380 164 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.5□□□□□ -2.33
CXCL1P09341 BNIP3P8-201ENST00000597863 560 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 AC008751.2-201ENST00000597885 980 ntBASIC0.5□□□□□ -2.33
CXCL1P09341 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CXCL1P09341 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms