Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RNU6-1140P-201ENST00000410517 106 ntBASIC3.82□□□□□ -1.8
APPP05067 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.82□□□□□ -1.8
APPP05067 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.82□□□□□ -1.8
APPP05067 AL031659.1-201ENST00000447075 539 ntBASIC3.82□□□□□ -1.8
APPP05067 AC115115.1-201ENST00000449927 248 ntBASIC3.82□□□□□ -1.8
APPP05067 OR2AQ1P-201ENST00000451972 200 ntBASIC3.82□□□□□ -1.8
APPP05067 RN7SL863P-201ENST00000462370 296 ntBASIC3.82□□□□□ -1.8
APPP05067 AC109925.1-201ENST00000478069 331 ntBASIC3.82□□□□□ -1.8
APPP05067 MRPL42P6-201ENST00000486397 371 ntBASIC3.82□□□□□ -1.8
APPP05067 Y_RNA.720-201ENST00000517166 92 ntBASIC3.82□□□□□ -1.8
APPP05067 SNORD116.3-201ENST00000517176 78 ntBASIC3.82□□□□□ -1.8
APPP05067 RN7SKP57-201ENST00000517248 293 ntBASIC3.82□□□□□ -1.8
APPP05067 AC068657.1-201ENST00000520807 306 ntBASIC3.82□□□□□ -1.8
APPP05067 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
APPP05067 AC068831.7-201ENST00000616954 363 ntBASIC3.82□□□□□ -1.8
APPP05067 AC002076.2-201ENST00000617362 122 ntBASIC3.82□□□□□ -1.8
APPP05067 AL162373.1-201ENST00000620433 407 ntBASIC3.82□□□□□ -1.8
APPP05067 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.82□□□□□ -1.8
APPP05067 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
APPP05067 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.82□□□□□ -1.8
APPP05067 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
APPP05067 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.82□□□□□ -1.8
APPP05067 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.82□□□□□ -1.8
APPP05067 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
APPP05067 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
APPP05067 RNU6-858P-201ENST00000362436 107 ntBASIC3.81□□□□□ -1.8
APPP05067 RNU6-1309P-201ENST00000363305 108 ntBASIC3.81□□□□□ -1.8
APPP05067 RNU6-596P-201ENST00000365395 98 ntBASIC3.81□□□□□ -1.8
APPP05067 Y_RNA.428-201ENST00000384078 102 ntBASIC3.81□□□□□ -1.8
APPP05067 MIR491-201ENST00000384877 84 ntBASIC3.81□□□□□ -1.8
APPP05067 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.81□□□□□ -1.8
APPP05067 BX679664.1-201ENST00000434429 253 ntBASIC3.81□□□□□ -1.8
APPP05067 AC243964.1-201ENST00000441814 261 ntBASIC3.81□□□□□ -1.8
APPP05067 HMGN2P10-201ENST00000448085 265 ntBASIC3.81□□□□□ -1.8
APPP05067 RPL17P19-201ENST00000489069 552 ntBASIC3.81□□□□□ -1.8
APPP05067 RPL23AP49-201ENST00000492925 468 ntBASIC3.81□□□□□ -1.8
APPP05067 RNU6-264P-201ENST00000517134 104 ntBASIC3.81□□□□□ -1.8
APPP05067 AP004607.1-201ENST00000524456 203 ntBASIC3.81□□□□□ -1.8
APPP05067 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.81□□□□□ -1.8
APPP05067 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.81□□□□□ -1.8
APPP05067 AP000787.2-201ENST00000604432 568 ntBASIC3.81□□□□□ -1.8
APPP05067 YPEL5P2-201ENST00000605553 359 ntBASIC3.81□□□□□ -1.8
APPP05067 MIR8076-201ENST00000611401 83 ntBASIC3.81□□□□□ -1.8
APPP05067 uc_338.25-201ENST00000613756 156 ntBASIC3.81□□□□□ -1.8
APPP05067 AC018692.3-201ENST00000623929 123 ntBASIC3.81□□□□□ -1.8
APPP05067 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.81□□□□□ -1.8
APPP05067 SCARNA4-202ENST00000625402 129 ntBASIC3.81□□□□□ -1.8
APPP05067 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.81□□□□□ -1.8
APPP05067 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.81□□□□□ -1.8
APPP05067 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.81□□□□□ -1.8
APPP05067 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.8□□□□□ -1.8
APPP05067 Y_RNA.422-201ENST00000384054 114 ntBASIC3.8□□□□□ -1.8
APPP05067 RNU6-1105P-201ENST00000384774 107 ntBASIC3.8□□□□□ -1.8
APPP05067 MIR568-201ENST00000385036 95 ntBASIC3.8□□□□□ -1.8
APPP05067 AL133475.1-201ENST00000404414 305 ntBASIC3.8□□□□□ -1.8
APPP05067 RNU6-1156P-201ENST00000410365 100 ntBASIC3.8□□□□□ -1.8
APPP05067 RNA5SP494-201ENST00000410653 129 ntBASIC3.8□□□□□ -1.8
APPP05067 RNU2-49P-201ENST00000410666 184 ntBASIC3.8□□□□□ -1.8
APPP05067 Z82188.1-201ENST00000436709 154 ntBASIC3.8□□□□□ -1.8
APPP05067 U8.21-201ENST00000459536 136 ntBASIC3.8□□□□□ -1.8
APPP05067 SNRPGP7-201ENST00000469016 106 ntBASIC3.8□□□□□ -1.8
APPP05067 AC116655.1-201ENST00000508324 901 ntBASIC3.8□□□□□ -1.8
APPP05067 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.8□□□□□ -1.8
APPP05067 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.8□□□□□ -1.8
APPP05067 AC109479.2-201ENST00000517842 174 ntBASIC3.8□□□□□ -1.8
APPP05067 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
APPP05067 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.8□□□□□ -1.8
APPP05067 AC021739.1-201ENST00000559631 174 ntBASIC3.8□□□□□ -1.8
APPP05067 AC024153.1-201ENST00000603103 365 ntBASIC3.8□□□□□ -1.8
APPP05067 AC018889.1-201ENST00000605372 397 ntBASIC3.8□□□□□ -1.8
APPP05067 AC009318.2-201ENST00000610917 651 ntBASIC3.8□□□□□ -1.8
APPP05067 AF117829.1-206ENST00000621883 3802 ntBASIC3.8□□□□□ -1.8
APPP05067 MTND5P9-201ENST00000503854 1755 ntBASIC3.8□□□□□ -1.8
APPP05067 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.8□□□□□ -1.8
APPP05067 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
APPP05067 Y_RNA.158-201ENST00000363651 101 ntBASIC3.79□□□□□ -1.8
APPP05067 AL591034.2-201ENST00000402839 359 ntBASIC3.79□□□□□ -1.8
APPP05067 RNU6-985P-201ENST00000410182 104 ntBASIC3.79□□□□□ -1.8
APPP05067 NDUFS5P4-201ENST00000412983 318 ntBASIC3.79□□□□□ -1.8
APPP05067 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.79□□□□□ -1.8
APPP05067 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.79□□□□□ -1.8
APPP05067 MTND3P2-201ENST00000438452 342 ntBASIC3.79□□□□□ -1.8
APPP05067 AL714022.1-201ENST00000439897 151 ntBASIC3.79□□□□□ -1.8
APPP05067 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.79□□□□□ -1.8
APPP05067 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.79□□□□□ -1.8
APPP05067 SNORA25.10-201ENST00000515926 124 ntBASIC3.79□□□□□ -1.8
APPP05067 AP000889.1-201ENST00000530968 660 ntBASIC3.79□□□□□ -1.8
APPP05067 AC007536.1-201ENST00000533382 349 ntBASIC3.79□□□□□ -1.8
APPP05067 AC006199.1-201ENST00000548728 219 ntBASIC3.79□□□□□ -1.8
APPP05067 SUB1P3-201ENST00000564581 315 ntBASIC3.79□□□□□ -1.8
APPP05067 MIR5696-201ENST00000578474 85 ntBASIC3.79□□□□□ -1.8
APPP05067 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.79□□□□□ -1.8
APPP05067 UBL5P2-201ENST00000583788 219 ntBASIC3.79□□□□□ -1.8
APPP05067 AC005899.2-201ENST00000584353 90 ntBASIC3.79□□□□□ -1.8
APPP05067 MIR6076-201ENST00000617521 113 ntBASIC3.79□□□□□ -1.8
APPP05067 AC138305.3-201ENST00000624988 240 ntBASIC3.79□□□□□ -1.8
APPP05067 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
APPP05067 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APPP05067 ADAM3A-203ENST00000461344 2157 ntBASIC3.78□□□□□ -1.8
APPP05067 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms