Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.43□□□□□ -2.02
VTNP04004 COX6CP5-201ENST00000527162 228 ntBASIC2.43□□□□□ -2.02
VTNP04004 MTCO3P23-201ENST00000561363 289 ntBASIC2.43□□□□□ -2.02
VTNP04004 AC060780.3-201ENST00000589464 80 ntBASIC2.43□□□□□ -2.02
VTNP04004 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.43□□□□□ -2.02
VTNP04004 RMST_4.1-201ENST00000616886 107 ntBASIC2.43□□□□□ -2.02
VTNP04004 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.43□□□□□ -2.02
VTNP04004 MIR6134-201ENST00000617606 109 ntBASIC2.43□□□□□ -2.02
VTNP04004 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.43□□□□□ -2.02
VTNP04004 AC006504.8-201ENST00000621046 635 ntBASIC2.43□□□□□ -2.02
VTNP04004 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.43□□□□□ -2.02
VTNP04004 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VTNP04004 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VTNP04004 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VTNP04004 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
VTNP04004 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
VTNP04004 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VTNP04004 Y_RNA.390-201ENST00000383932 102 ntBASIC2.42□□□□□ -2.02
VTNP04004 RNU6-19P-201ENST00000384718 107 ntBASIC2.42□□□□□ -2.02
VTNP04004 MIR518D-201ENST00000385014 87 ntBASIC2.42□□□□□ -2.02
VTNP04004 MT-TL1-201ENST00000386347 75 ntBASIC2.42□□□□□ -2.02
VTNP04004 MIR450B-201ENST00000401182 78 ntBASIC2.42□□□□□ -2.02
VTNP04004 MIR1289-2-201ENST00000408360 111 ntBASIC2.42□□□□□ -2.02
VTNP04004 SNORA11.4-201ENST00000408823 129 ntBASIC2.42□□□□□ -2.02
VTNP04004 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.42□□□□□ -2.02
VTNP04004 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.42□□□□□ -2.02
VTNP04004 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.42□□□□□ -2.02
VTNP04004 AC116353.2-201ENST00000505332 712 ntBASIC2.42□□□□□ -2.02
VTNP04004 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VTNP04004 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.42□□□□□ -2.02
VTNP04004 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.42□□□□□ -2.02
VTNP04004 RNU5F-8P-201ENST00000515941 111 ntBASIC2.42□□□□□ -2.02
VTNP04004 SNORA31.6-201ENST00000516241 130 ntBASIC2.42□□□□□ -2.02
VTNP04004 SNORD19.2-201ENST00000516978 73 ntBASIC2.42□□□□□ -2.02
VTNP04004 RNU6-1314P-201ENST00000517139 104 ntBASIC2.42□□□□□ -2.02
VTNP04004 RN7SKP40-201ENST00000517211 242 ntBASIC2.42□□□□□ -2.02
VTNP04004 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.42□□□□□ -2.02
VTNP04004 CYCSP27-201ENST00000527643 293 ntBASIC2.42□□□□□ -2.02
VTNP04004 HSPE1P20-201ENST00000538133 289 ntBASIC2.42□□□□□ -2.02
VTNP04004 AC025423.5-201ENST00000550230 219 ntBASIC2.42□□□□□ -2.02
VTNP04004 AC011712.1-201ENST00000588959 234 ntBASIC2.42□□□□□ -2.02
VTNP04004 AL158827.2-201ENST00000602494 330 ntBASIC2.42□□□□□ -2.02
VTNP04004 AL391813.1-201ENST00000603098 260 ntBASIC2.42□□□□□ -2.02
VTNP04004 APOOP1-201ENST00000604695 592 ntBASIC2.42□□□□□ -2.02
VTNP04004 AC123912.5-201ENST00000605470 343 ntBASIC2.42□□□□□ -2.02
VTNP04004 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.42□□□□□ -2.02
VTNP04004 AC010297.1-201ENST00000623948 149 ntBASIC2.42□□□□□ -2.02
VTNP04004 AL691447.3-201ENST00000635020 330 ntBASIC2.42□□□□□ -2.02
VTNP04004 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
VTNP04004 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.42□□□□□ -2.02
VTNP04004 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VTNP04004 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.41□□□□□ -2.02
VTNP04004 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.41□□□□□ -2.02
VTNP04004 RNU6-461P-201ENST00000364195 107 ntBASIC2.41□□□□□ -2.02
VTNP04004 RPL21P75-201ENST00000396599 483 ntBASIC2.41□□□□□ -2.02
VTNP04004 RPL21P28-201ENST00000401418 483 ntBASIC2.41□□□□□ -2.02
VTNP04004 FTH1P15-201ENST00000406984 280 ntBASIC2.41□□□□□ -2.02
VTNP04004 RNU6-1328P-201ENST00000410938 106 ntBASIC2.41□□□□□ -2.02
VTNP04004 RNU2-25P-201ENST00000411041 191 ntBASIC2.41□□□□□ -2.02
VTNP04004 RNA5SP492-201ENST00000411330 114 ntBASIC2.41□□□□□ -2.02
VTNP04004 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.41□□□□□ -2.02
VTNP04004 RPL21P39-201ENST00000463605 483 ntBASIC2.41□□□□□ -2.02
VTNP04004 AC087190.1-201ENST00000484462 480 ntBASIC2.41□□□□□ -2.02
VTNP04004 AC093591.1-201ENST00000491435 481 ntBASIC2.41□□□□□ -2.02
VTNP04004 RPL21P16-201ENST00000495531 483 ntBASIC2.41□□□□□ -2.02
VTNP04004 GZMAP1-201ENST00000503054 631 ntBASIC2.41□□□□□ -2.02
VTNP04004 AC079140.5-201ENST00000507882 310 ntBASIC2.41□□□□□ -2.02
VTNP04004 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.41□□□□□ -2.02
VTNP04004 RNU6-1332P-201ENST00000516666 104 ntBASIC2.41□□□□□ -2.02
VTNP04004 MIR5692C1-201ENST00000585309 91 ntBASIC2.41□□□□□ -2.02
VTNP04004 AC018638.8-201ENST00000588755 281 ntBASIC2.41□□□□□ -2.02
VTNP04004 BNIP3P25-201ENST00000596023 559 ntBASIC2.41□□□□□ -2.02
VTNP04004 AC091152.3-201ENST00000604227 325 ntBASIC2.41□□□□□ -2.02
VTNP04004 AC009831.4-201ENST00000620744 325 ntBASIC2.41□□□□□ -2.02
VTNP04004 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.41□□□□□ -2.02
VTNP04004 MIR7843-201ENST00000622274 79 ntBASIC2.41□□□□□ -2.02
VTNP04004 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VTNP04004 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
VTNP04004 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VTNP04004 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VTNP04004 Y_RNA.167-201ENST00000363735 109 ntBASIC2.4□□□□□ -2.03
VTNP04004 RNU5E-7P-201ENST00000365290 117 ntBASIC2.4□□□□□ -2.03
VTNP04004 SNORD73A-201ENST00000386062 65 ntBASIC2.4□□□□□ -2.03
VTNP04004 MIR147B-201ENST00000390185 80 ntBASIC2.4□□□□□ -2.03
VTNP04004 AL133475.1-201ENST00000404414 305 ntBASIC2.4□□□□□ -2.03
VTNP04004 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.4□□□□□ -2.03
VTNP04004 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.4□□□□□ -2.03
VTNP04004 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.4□□□□□ -2.03
VTNP04004 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.4□□□□□ -2.03
VTNP04004 RPL7P12-201ENST00000446719 750 ntBASIC2.4□□□□□ -2.03
VTNP04004 MRPL42P6-201ENST00000486397 371 ntBASIC2.4□□□□□ -2.03
VTNP04004 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.4□□□□□ -2.03
VTNP04004 SNORA31.18-201ENST00000517043 134 ntBASIC2.4□□□□□ -2.03
VTNP04004 ACA59.2-201ENST00000517061 156 ntBASIC2.4□□□□□ -2.03
VTNP04004 AC107953.1-201ENST00000522216 297 ntBASIC2.4□□□□□ -2.03
VTNP04004 AP004607.1-201ENST00000524456 203 ntBASIC2.4□□□□□ -2.03
VTNP04004 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.4□□□□□ -2.03
VTNP04004 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.4□□□□□ -2.03
VTNP04004 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.4□□□□□ -2.03
VTNP04004 PSMA3P-201ENST00000555485 635 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms