Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 MTND5P6-201ENST00000422338 1798 ntBASIC3.32□□□□□ -1.88
COL3A1P02461 AC069528.2-201ENST00000624849 1991 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
COL3A1P02461 Y_RNA.60-201ENST00000362831 98 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 Y_RNA.214-201ENST00000364201 112 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 RNU6-842P-201ENST00000384269 107 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 Y_RNA.526-201ENST00000384572 110 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.31□□□□□ -1.88
COL3A1P02461 AC139712.2-201ENST00000424302 339 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 AL392103.1-201ENST00000447000 198 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 AL590664.1-201ENST00000448065 339 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 RPL31P60-201ENST00000478450 367 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 SNORA25.11-201ENST00000515935 105 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 Y_RNA.689-201ENST00000516589 107 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.31□□□□□ -1.88
COL3A1P02461 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.31□□□□□ -1.88
COL3A1P02461 AC025423.5-201ENST00000550230 219 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 AC096772.1-201ENST00000609146 564 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.31□□□□□ -1.88
COL3A1P02461 DDX10P1-201ENST00000448545 1933 ntBASIC3.31□□□□□ -1.88
COL3A1P02461 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.31□□□□□ -1.88
COL3A1P02461 AC009487.4-201ENST00000624969 3585 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 AL606537.1-201ENST00000607258 2011 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
COL3A1P02461 PABPC1P7-201ENST00000413177 1513 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 AL157777.2-201ENST00000258070 137 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 RNU6-770P-201ENST00000363929 105 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 RNU6-200P-201ENST00000364743 107 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 SNORD21-201ENST00000383953 95 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 RNU6-701P-201ENST00000384059 107 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 Y_RNA.480-201ENST00000384364 102 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 RPS4XP7-201ENST00000406274 780 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 RNU2-21P-201ENST00000410368 188 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 RNU4-65P-201ENST00000410473 140 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 AL590135.1-201ENST00000422215 156 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 AL031274.1-201ENST00000450334 232 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 MTND4LP30-201ENST00000454092 297 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 AC234775.1-201ENST00000454247 670 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 PCMTD1P1-201ENST00000455560 355 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 HMGB1P35-201ENST00000503360 598 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 AC107918.3-201ENST00000533272 382 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.3□□□□□ -1.88
COL3A1P02461 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.3□□□□□ -1.88
COL3A1P02461 MIR5188-201ENST00000583467 113 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 MIR4272-201ENST00000635924 64 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.3□□□□□ -1.88
COL3A1P02461 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
COL3A1P02461 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.3□□□□□ -1.88
COL3A1P02461 RNU6-1059P-201ENST00000363752 98 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 RNA5SP456-201ENST00000364002 114 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 Y_RNA.785-201ENST00000384290 109 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 Y_RNA.477-201ENST00000384352 108 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 Y_RNA.483-201ENST00000384380 101 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 MIR517A-201ENST00000385001 87 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 MIR504-201ENST00000385065 83 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 RNU6-1093P-201ENST00000391194 107 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 MIR887-201ENST00000401258 79 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 RNU2-38P-201ENST00000410856 79 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 ELOCP20-201ENST00000422460 345 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 PSMA2P3-201ENST00000429685 675 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 RPL23AP33-201ENST00000442301 452 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 AL121871.1-201ENST00000443413 436 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 EEF1B2P7-201ENST00000451177 676 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.29□□□□□ -1.88
COL3A1P02461 AC234781.5-201ENST00000508429 271 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 MTND1P19-201ENST00000511780 315 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 SNORA40.15-201ENST00000516884 107 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.29□□□□□ -1.88
COL3A1P02461 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.29□□□□□ -1.88
COL3A1P02461 AL031176.1-201ENST00000604554 466 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 CTSLP2-204ENST00000629029 392 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 AL512643.1-201ENST00000635735 524 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 AC010329.2-201ENST00000595195 2737 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL3A1P02461 AC093775.1-201ENST00000624154 1868 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL3A1P02461 AC008669.1-201ENST00000565823 2178 ntBASIC3.29□□□□□ -1.88
COL3A1P02461 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
COL3A1P02461 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL3A1P02461 Y_RNA.64-201ENST00000362845 102 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 Y_RNA.151-201ENST00000363566 112 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 RNU6-596P-201ENST00000365395 98 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 RNU6-190P-201ENST00000384154 102 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 Y_RNA.562-201ENST00000384695 113 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 SNORA19-201ENST00000384737 128 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 MTCO1P39-201ENST00000426148 480 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.28□□□□□ -1.88
COL3A1P02461 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.28□□□□□ -1.88
COL3A1P02461 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
COL3A1P02461 AC243772.1-201ENST00000451620 410 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 snoU13.15-201ENST00000459407 104 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 AC010631.1-201ENST00000474150 156 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.28□□□□□ -1.88
COL3A1P02461 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.28□□□□□ -1.88
COL3A1P02461 AC105758.1-201ENST00000506038 399 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 RNU6-991P-201ENST00000516168 107 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 Y_RNA.700-201ENST00000516806 100 ntBASIC3.28□□□□□ -1.88
COL3A1P02461 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.28□□□□□ -1.88
COL3A1P02461 CR383656.7-201ENST00000548164 174 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms